Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRCH1Q9Y2L9 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRCH1Q9Y2L9 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRCH1Q9Y2L9 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRCH1Q9Y2L9 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRCH1Q9Y2L9 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LRCH1Q9Y2L9 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRCH1Q9Y2L9 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRCH1Q9Y2L9 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRCH1Q9Y2L9 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
LRCH1Q9Y2L9 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRCH1Q9Y2L9 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
LRCH1Q9Y2L9 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC17.07■□□□□ 0.32
LRCH1Q9Y2L9 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRCH1Q9Y2L9 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LRCH1Q9Y2L9 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRCH1Q9Y2L9 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LRCH1Q9Y2L9 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.07■□□□□ 0.32
LRCH1Q9Y2L9 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
LRCH1Q9Y2L9 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.07■□□□□ 0.32
LRCH1Q9Y2L9 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LRCH1Q9Y2L9 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRCH1Q9Y2L9 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
LRCH1Q9Y2L9 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRCH1Q9Y2L9 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRCH1Q9Y2L9 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRCH1Q9Y2L9 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC17.07■□□□□ 0.32
LRCH1Q9Y2L9 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRCH1Q9Y2L9 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC17.07■□□□□ 0.32
LRCH1Q9Y2L9 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.07■□□□□ 0.32
LRCH1Q9Y2L9 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRCH1Q9Y2L9 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LRCH1Q9Y2L9 KRT18P68-201ENST00000392293 1000 ntBASIC17.07■□□□□ 0.32
LRCH1Q9Y2L9 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
LRCH1Q9Y2L9 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
LRCH1Q9Y2L9 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
LRCH1Q9Y2L9 AC091874.3-201ENST00000512672 1195 ntBASIC17.07■□□□□ 0.32
LRCH1Q9Y2L9 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
LRCH1Q9Y2L9 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC17.07■□□□□ 0.32
LRCH1Q9Y2L9 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRCH1Q9Y2L9 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC17.07■□□□□ 0.32
LRCH1Q9Y2L9 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRCH1Q9Y2L9 AL357033.4-201ENST00000617703 1807 ntBASIC17.07■□□□□ 0.32
LRCH1Q9Y2L9 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRCH1Q9Y2L9 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
LRCH1Q9Y2L9 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRCH1Q9Y2L9 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRCH1Q9Y2L9 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRCH1Q9Y2L9 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LRCH1Q9Y2L9 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
LRCH1Q9Y2L9 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRCH1Q9Y2L9 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRCH1Q9Y2L9 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRCH1Q9Y2L9 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
LRCH1Q9Y2L9 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
LRCH1Q9Y2L9 AC132872.4-202ENST00000622924 2756 ntBASIC17.06■□□□□ 0.32
LRCH1Q9Y2L9 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LRCH1Q9Y2L9 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LRCH1Q9Y2L9 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
LRCH1Q9Y2L9 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRCH1Q9Y2L9 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRCH1Q9Y2L9 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRCH1Q9Y2L9 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC17.06■□□□□ 0.32
LRCH1Q9Y2L9 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LRCH1Q9Y2L9 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRCH1Q9Y2L9 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRCH1Q9Y2L9 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
LRCH1Q9Y2L9 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LRCH1Q9Y2L9 DUSP5P2-201ENST00000426873 1033 ntBASIC17.06■□□□□ 0.32
LRCH1Q9Y2L9 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
LRCH1Q9Y2L9 TSPY23P-201ENST00000440136 739 ntBASIC17.06■□□□□ 0.32
LRCH1Q9Y2L9 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LRCH1Q9Y2L9 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
LRCH1Q9Y2L9 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.06■□□□□ 0.32
LRCH1Q9Y2L9 AL136379.1-201ENST00000623471 2642 ntBASIC17.06■□□□□ 0.32
LRCH1Q9Y2L9 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRCH1Q9Y2L9 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRCH1Q9Y2L9 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.06■□□□□ 0.32
LRCH1Q9Y2L9 AC023824.1-201ENST00000562945 2975 ntBASIC17.06■□□□□ 0.32
LRCH1Q9Y2L9 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LRCH1Q9Y2L9 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC17.06■□□□□ 0.32
LRCH1Q9Y2L9 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LRCH1Q9Y2L9 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
LRCH1Q9Y2L9 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
LRCH1Q9Y2L9 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
LRCH1Q9Y2L9 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
LRCH1Q9Y2L9 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.05■□□□□ 0.32
LRCH1Q9Y2L9 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.05■□□□□ 0.32
LRCH1Q9Y2L9 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRCH1Q9Y2L9 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.05■□□□□ 0.32
LRCH1Q9Y2L9 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRCH1Q9Y2L9 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LRCH1Q9Y2L9 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.05■□□□□ 0.32
LRCH1Q9Y2L9 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRCH1Q9Y2L9 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRCH1Q9Y2L9 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
LRCH1Q9Y2L9 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.05■□□□□ 0.32
LRCH1Q9Y2L9 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.05■□□□□ 0.32
LRCH1Q9Y2L9 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LRCH1Q9Y2L9 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 136.8 ms