Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC20.57■□□□□ 0.88
SYNPO2Q9UMS6 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC20.57■□□□□ 0.88
SYNPO2Q9UMS6 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC20.57■□□□□ 0.88
SYNPO2Q9UMS6 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC20.57■□□□□ 0.88
SYNPO2Q9UMS6 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC20.57■□□□□ 0.88
SYNPO2Q9UMS6 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
SYNPO2Q9UMS6 CD63-204ENST00000546939 779 ntTSL 3 BASIC20.57■□□□□ 0.88
SYNPO2Q9UMS6 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC20.57■□□□□ 0.88
SYNPO2Q9UMS6 RNF151-202ENST00000569210 853 ntTSL 2 BASIC20.57■□□□□ 0.88
SYNPO2Q9UMS6 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC20.57■□□□□ 0.88
SYNPO2Q9UMS6 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
SYNPO2Q9UMS6 AC116407.3-201ENST00000623905 1129 ntBASIC20.57■□□□□ 0.88
SYNPO2Q9UMS6 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
SYNPO2Q9UMS6 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC20.57■□□□□ 0.88
SYNPO2Q9UMS6 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SYNPO2Q9UMS6 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SYNPO2Q9UMS6 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SYNPO2Q9UMS6 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
SYNPO2Q9UMS6 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SYNPO2Q9UMS6 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SYNPO2Q9UMS6 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SYNPO2Q9UMS6 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SYNPO2Q9UMS6 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
SYNPO2Q9UMS6 REXO1L9P-201ENST00000604264 2108 ntBASIC20.56■□□□□ 0.88
SYNPO2Q9UMS6 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
SYNPO2Q9UMS6 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC20.56■□□□□ 0.88
SYNPO2Q9UMS6 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SYNPO2Q9UMS6 AC132938.5-201ENST00000624980 1813 ntBASIC20.56■□□□□ 0.88
SYNPO2Q9UMS6 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
SYNPO2Q9UMS6 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
SYNPO2Q9UMS6 AC005104.2-201ENST00000427818 678 ntBASIC20.56■□□□□ 0.88
SYNPO2Q9UMS6 PMS2P1-201ENST00000431037 1228 ntBASIC20.56■□□□□ 0.88
SYNPO2Q9UMS6 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
SYNPO2Q9UMS6 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SYNPO2Q9UMS6 IGHV3-22-201ENST00000520721 359 ntBASIC20.56■□□□□ 0.88
SYNPO2Q9UMS6 AC145285.3-201ENST00000564603 959 ntBASIC20.56■□□□□ 0.88
SYNPO2Q9UMS6 AC106730.1-201ENST00000566722 1090 ntBASIC20.56■□□□□ 0.88
SYNPO2Q9UMS6 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SYNPO2Q9UMS6 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC20.56■□□□□ 0.88
SYNPO2Q9UMS6 ABBA01031661.1-201ENST00000634362 1253 ntBASIC20.56■□□□□ 0.88
SYNPO2Q9UMS6 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SYNPO2Q9UMS6 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC20.56■□□□□ 0.88
SYNPO2Q9UMS6 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SYNPO2Q9UMS6 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SYNPO2Q9UMS6 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
SYNPO2Q9UMS6 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.56■□□□□ 0.88
SYNPO2Q9UMS6 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC20.56■□□□□ 0.88
SYNPO2Q9UMS6 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
SYNPO2Q9UMS6 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SYNPO2Q9UMS6 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SYNPO2Q9UMS6 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SYNPO2Q9UMS6 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
SYNPO2Q9UMS6 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SYNPO2Q9UMS6 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SYNPO2Q9UMS6 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC20.55■□□□□ 0.88
SYNPO2Q9UMS6 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC20.55■□□□□ 0.88
SYNPO2Q9UMS6 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SYNPO2Q9UMS6 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC20.55■□□□□ 0.88
SYNPO2Q9UMS6 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC20.55■□□□□ 0.88
SYNPO2Q9UMS6 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC20.55■□□□□ 0.88
SYNPO2Q9UMS6 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC20.55■□□□□ 0.88
SYNPO2Q9UMS6 TMED1-207ENST00000591695 809 ntTSL 5 BASIC20.55■□□□□ 0.88
SYNPO2Q9UMS6 AL589182.2-201ENST00000619332 1049 ntBASIC20.55■□□□□ 0.88
SYNPO2Q9UMS6 PC-208ENST00000529047 1607 ntTSL 3 BASIC20.55■□□□□ 0.88
SYNPO2Q9UMS6 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SYNPO2Q9UMS6 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.55■□□□□ 0.88
SYNPO2Q9UMS6 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC20.55■□□□□ 0.88
SYNPO2Q9UMS6 AC009949.1-201ENST00000623048 1830 ntBASIC20.55■□□□□ 0.88
SYNPO2Q9UMS6 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SYNPO2Q9UMS6 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC20.54■□□□□ 0.88
SYNPO2Q9UMS6 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC20.54■□□□□ 0.88
SYNPO2Q9UMS6 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SYNPO2Q9UMS6 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SYNPO2Q9UMS6 FUT8-AS1-201ENST00000621019 1521 ntBASIC20.54■□□□□ 0.88
SYNPO2Q9UMS6 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SYNPO2Q9UMS6 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SYNPO2Q9UMS6 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
SYNPO2Q9UMS6 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SYNPO2Q9UMS6 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC20.54■□□□□ 0.88
SYNPO2Q9UMS6 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC20.54■□□□□ 0.88
SYNPO2Q9UMS6 KRT18P27-201ENST00000427733 1299 ntBASIC20.54■□□□□ 0.88
SYNPO2Q9UMS6 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC20.54■□□□□ 0.88
SYNPO2Q9UMS6 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
SYNPO2Q9UMS6 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SYNPO2Q9UMS6 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
SYNPO2Q9UMS6 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SYNPO2Q9UMS6 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SYNPO2Q9UMS6 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SYNPO2Q9UMS6 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SYNPO2Q9UMS6 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
SYNPO2Q9UMS6 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC20.54■□□□□ 0.88
SYNPO2Q9UMS6 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.54■□□□□ 0.88
SYNPO2Q9UMS6 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC20.54■□□□□ 0.88
SYNPO2Q9UMS6 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SYNPO2Q9UMS6 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC20.53■□□□□ 0.88
SYNPO2Q9UMS6 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SYNPO2Q9UMS6 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
SYNPO2Q9UMS6 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
SYNPO2Q9UMS6 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SYNPO2Q9UMS6 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms