Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDH9Q9ULB4 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.92■□□□□ 0.62
CDH9Q9ULB4 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.92■□□□□ 0.62
CDH9Q9ULB4 AKR1C7P-201ENST00000305623 895 ntBASIC18.92■□□□□ 0.62
CDH9Q9ULB4 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
CDH9Q9ULB4 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDH9Q9ULB4 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.92■□□□□ 0.62
CDH9Q9ULB4 AC132008.2-207ENST00000454517 770 ntBASIC18.92■□□□□ 0.62
CDH9Q9ULB4 SAPCD2P3-201ENST00000455031 850 ntBASIC18.92■□□□□ 0.62
CDH9Q9ULB4 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.92■□□□□ 0.62
CDH9Q9ULB4 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
CDH9Q9ULB4 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.92■□□□□ 0.62
CDH9Q9ULB4 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.92■□□□□ 0.62
CDH9Q9ULB4 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CDH9Q9ULB4 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.92■□□□□ 0.62
CDH9Q9ULB4 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.92■□□□□ 0.62
CDH9Q9ULB4 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.92■□□□□ 0.62
CDH9Q9ULB4 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.92■□□□□ 0.62
CDH9Q9ULB4 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDH9Q9ULB4 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CDH9Q9ULB4 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CDH9Q9ULB4 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CDH9Q9ULB4 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDH9Q9ULB4 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDH9Q9ULB4 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDH9Q9ULB4 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CDH9Q9ULB4 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CDH9Q9ULB4 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CDH9Q9ULB4 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.92■□□□□ 0.62
CDH9Q9ULB4 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
CDH9Q9ULB4 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CDH9Q9ULB4 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.92■□□□□ 0.62
CDH9Q9ULB4 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CDH9Q9ULB4 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.91■□□□□ 0.62
CDH9Q9ULB4 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDH9Q9ULB4 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.91■□□□□ 0.62
CDH9Q9ULB4 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CDH9Q9ULB4 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDH9Q9ULB4 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDH9Q9ULB4 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDH9Q9ULB4 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.91■□□□□ 0.62
CDH9Q9ULB4 AC010460.3-201ENST00000511359 1579 ntBASIC18.91■□□□□ 0.62
CDH9Q9ULB4 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDH9Q9ULB4 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDH9Q9ULB4 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CDH9Q9ULB4 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.91■□□□□ 0.62
CDH9Q9ULB4 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.91■□□□□ 0.62
CDH9Q9ULB4 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CDH9Q9ULB4 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDH9Q9ULB4 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CDH9Q9ULB4 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.91■□□□□ 0.62
CDH9Q9ULB4 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDH9Q9ULB4 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
CDH9Q9ULB4 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.91■□□□□ 0.62
CDH9Q9ULB4 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.91■□□□□ 0.62
CDH9Q9ULB4 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.91■□□□□ 0.62
CDH9Q9ULB4 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
CDH9Q9ULB4 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
CDH9Q9ULB4 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CDH9Q9ULB4 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDH9Q9ULB4 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDH9Q9ULB4 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDH9Q9ULB4 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.91■□□□□ 0.62
CDH9Q9ULB4 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.91■□□□□ 0.62
CDH9Q9ULB4 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.91■□□□□ 0.62
CDH9Q9ULB4 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CDH9Q9ULB4 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
CDH9Q9ULB4 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDH9Q9ULB4 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.9■□□□□ 0.62
CDH9Q9ULB4 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CDH9Q9ULB4 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.9■□□□□ 0.62
CDH9Q9ULB4 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CDH9Q9ULB4 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH9Q9ULB4 AC100803.2-201ENST00000562459 1963 ntBASIC18.9■□□□□ 0.62
CDH9Q9ULB4 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.9■□□□□ 0.62
CDH9Q9ULB4 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH9Q9ULB4 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH9Q9ULB4 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.9■□□□□ 0.62
CDH9Q9ULB4 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CDH9Q9ULB4 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
CDH9Q9ULB4 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.9■□□□□ 0.62
CDH9Q9ULB4 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH9Q9ULB4 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.9■□□□□ 0.62
CDH9Q9ULB4 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH9Q9ULB4 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.9■□□□□ 0.62
CDH9Q9ULB4 AC138028.4-201ENST00000564984 1845 ntBASIC18.9■□□□□ 0.62
CDH9Q9ULB4 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
CDH9Q9ULB4 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.9■□□□□ 0.62
CDH9Q9ULB4 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH9Q9ULB4 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH9Q9ULB4 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.9■□□□□ 0.62
CDH9Q9ULB4 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH9Q9ULB4 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH9Q9ULB4 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CDH9Q9ULB4 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
CDH9Q9ULB4 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.62
CDH9Q9ULB4 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CDH9Q9ULB4 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDH9Q9ULB4 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDH9Q9ULB4 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms