Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.44■□□□□ 0.22
LRFN1Q9P244 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRFN1Q9P244 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.44■□□□□ 0.22
LRFN1Q9P244 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRFN1Q9P244 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRFN1Q9P244 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
LRFN1Q9P244 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC16.43■□□□□ 0.22
LRFN1Q9P244 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRFN1Q9P244 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC16.43■□□□□ 0.22
LRFN1Q9P244 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRFN1Q9P244 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LRFN1Q9P244 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRFN1Q9P244 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.43■□□□□ 0.22
LRFN1Q9P244 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.43■□□□□ 0.22
LRFN1Q9P244 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRFN1Q9P244 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.43■□□□□ 0.22
LRFN1Q9P244 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.43■□□□□ 0.22
LRFN1Q9P244 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.43■□□□□ 0.22
LRFN1Q9P244 SLC25A6P4-201ENST00000586535 553 ntBASIC16.43■□□□□ 0.22
LRFN1Q9P244 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.43■□□□□ 0.22
LRFN1Q9P244 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.43■□□□□ 0.22
LRFN1Q9P244 AC011467.2-201ENST00000598425 242 ntBASIC16.43■□□□□ 0.22
LRFN1Q9P244 AC064862.7-201ENST00000604520 867 ntBASIC16.43■□□□□ 0.22
LRFN1Q9P244 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.43■□□□□ 0.22
LRFN1Q9P244 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.43■□□□□ 0.22
LRFN1Q9P244 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRFN1Q9P244 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRFN1Q9P244 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRFN1Q9P244 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC16.43■□□□□ 0.22
LRFN1Q9P244 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.43■□□□□ 0.22
LRFN1Q9P244 BX323043.1-201ENST00000641006 1765 ntBASIC16.43■□□□□ 0.22
LRFN1Q9P244 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.43■□□□□ 0.22
LRFN1Q9P244 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRFN1Q9P244 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRFN1Q9P244 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
LRFN1Q9P244 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LRFN1Q9P244 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
LRFN1Q9P244 INTS4P1-201ENST00000438455 1935 ntBASIC16.43■□□□□ 0.22
LRFN1Q9P244 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LRFN1Q9P244 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRFN1Q9P244 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LRFN1Q9P244 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.42■□□□□ 0.22
LRFN1Q9P244 HTR7P1-202ENST00000624664 4411 ntBASIC16.42■□□□□ 0.22
LRFN1Q9P244 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
LRFN1Q9P244 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
LRFN1Q9P244 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRFN1Q9P244 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRFN1Q9P244 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRFN1Q9P244 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRFN1Q9P244 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
LRFN1Q9P244 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.42■□□□□ 0.22
LRFN1Q9P244 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRFN1Q9P244 WIZP1-201ENST00000531444 2299 ntBASIC16.42■□□□□ 0.22
LRFN1Q9P244 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LRFN1Q9P244 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRFN1Q9P244 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
LRFN1Q9P244 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.42■□□□□ 0.22
LRFN1Q9P244 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LRFN1Q9P244 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LRFN1Q9P244 AC079776.4-201ENST00000511039 504 ntBASIC16.42■□□□□ 0.22
LRFN1Q9P244 AC106795.1-205ENST00000512851 1056 ntBASIC16.42■□□□□ 0.22
LRFN1Q9P244 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.42■□□□□ 0.22
LRFN1Q9P244 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.42■□□□□ 0.22
LRFN1Q9P244 AC008608.2-201ENST00000606089 416 ntBASIC16.42■□□□□ 0.22
LRFN1Q9P244 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LRFN1Q9P244 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.42■□□□□ 0.22
LRFN1Q9P244 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRFN1Q9P244 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.42■□□□□ 0.22
LRFN1Q9P244 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.42■□□□□ 0.22
LRFN1Q9P244 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRFN1Q9P244 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRFN1Q9P244 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRFN1Q9P244 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRFN1Q9P244 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.42■□□□□ 0.22
LRFN1Q9P244 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LRFN1Q9P244 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.42■□□□□ 0.22
LRFN1Q9P244 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.42■□□□□ 0.22
LRFN1Q9P244 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
LRFN1Q9P244 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.42■□□□□ 0.22
LRFN1Q9P244 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRFN1Q9P244 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.42■□□□□ 0.22
LRFN1Q9P244 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LRFN1Q9P244 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.42■□□□□ 0.22
LRFN1Q9P244 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LRFN1Q9P244 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.41■□□□□ 0.22
LRFN1Q9P244 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRFN1Q9P244 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LRFN1Q9P244 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRFN1Q9P244 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LRFN1Q9P244 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.41■□□□□ 0.22
LRFN1Q9P244 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
LRFN1Q9P244 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
LRFN1Q9P244 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.41■□□□□ 0.22
LRFN1Q9P244 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LRFN1Q9P244 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRFN1Q9P244 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRFN1Q9P244 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRFN1Q9P244 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRFN1Q9P244 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
LRFN1Q9P244 MRPL3P1-201ENST00000400109 1033 ntBASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms