Protein–RNA interactions for Protein: Q9NWD8

TMEM248, Transmembrane protein 248, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248Q9NWD8 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
TMEM248Q9NWD8 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
TMEM248Q9NWD8 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TMEM248Q9NWD8 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TMEM248Q9NWD8 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TMEM248Q9NWD8 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.31■□□□□ 0.52
TMEM248Q9NWD8 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.31■□□□□ 0.52
TMEM248Q9NWD8 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.31■□□□□ 0.52
TMEM248Q9NWD8 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.31■□□□□ 0.52
TMEM248Q9NWD8 AC007613.1-201ENST00000572811 2597 ntBASIC18.31■□□□□ 0.52
TMEM248Q9NWD8 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
TMEM248Q9NWD8 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TMEM248Q9NWD8 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TMEM248Q9NWD8 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TMEM248Q9NWD8 AC009949.1-201ENST00000623048 1830 ntBASIC18.3■□□□□ 0.52
TMEM248Q9NWD8 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.3■□□□□ 0.52
TMEM248Q9NWD8 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.3■□□□□ 0.52
TMEM248Q9NWD8 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TMEM248Q9NWD8 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TMEM248Q9NWD8 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TMEM248Q9NWD8 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.3■□□□□ 0.52
TMEM248Q9NWD8 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
TMEM248Q9NWD8 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TMEM248Q9NWD8 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TMEM248Q9NWD8 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
TMEM248Q9NWD8 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
TMEM248Q9NWD8 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
TMEM248Q9NWD8 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TMEM248Q9NWD8 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
TMEM248Q9NWD8 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TMEM248Q9NWD8 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.3■□□□□ 0.52
TMEM248Q9NWD8 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.3■□□□□ 0.52
TMEM248Q9NWD8 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.3■□□□□ 0.52
TMEM248Q9NWD8 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.3■□□□□ 0.52
TMEM248Q9NWD8 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.3■□□□□ 0.52
TMEM248Q9NWD8 MIR3652-201ENST00000579335 131 ntBASIC18.3■□□□□ 0.52
TMEM248Q9NWD8 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.3■□□□□ 0.52
TMEM248Q9NWD8 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TMEM248Q9NWD8 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TMEM248Q9NWD8 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TMEM248Q9NWD8 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TMEM248Q9NWD8 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.3■□□□□ 0.52
TMEM248Q9NWD8 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TMEM248Q9NWD8 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TMEM248Q9NWD8 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TMEM248Q9NWD8 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TMEM248Q9NWD8 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TMEM248Q9NWD8 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TMEM248Q9NWD8 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.29■□□□□ 0.52
TMEM248Q9NWD8 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
TMEM248Q9NWD8 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TMEM248Q9NWD8 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TMEM248Q9NWD8 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TMEM248Q9NWD8 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TMEM248Q9NWD8 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TMEM248Q9NWD8 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TMEM248Q9NWD8 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TMEM248Q9NWD8 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
TMEM248Q9NWD8 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.29■□□□□ 0.52
TMEM248Q9NWD8 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.29■□□□□ 0.52
TMEM248Q9NWD8 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.29■□□□□ 0.52
TMEM248Q9NWD8 MINOS1P3-201ENST00000457048 203 ntBASIC18.29■□□□□ 0.52
TMEM248Q9NWD8 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.29■□□□□ 0.52
TMEM248Q9NWD8 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.29■□□□□ 0.52
TMEM248Q9NWD8 AC009533.2-201ENST00000543664 586 ntBASIC18.29■□□□□ 0.52
TMEM248Q9NWD8 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.29■□□□□ 0.52
TMEM248Q9NWD8 BNIP3P18-201ENST00000593976 575 ntBASIC18.29■□□□□ 0.52
TMEM248Q9NWD8 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.29■□□□□ 0.52
TMEM248Q9NWD8 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.29■□□□□ 0.52
TMEM248Q9NWD8 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TMEM248Q9NWD8 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TMEM248Q9NWD8 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.29■□□□□ 0.52
TMEM248Q9NWD8 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TMEM248Q9NWD8 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TMEM248Q9NWD8 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
TMEM248Q9NWD8 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
TMEM248Q9NWD8 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
TMEM248Q9NWD8 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TMEM248Q9NWD8 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TMEM248Q9NWD8 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
TMEM248Q9NWD8 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TMEM248Q9NWD8 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
TMEM248Q9NWD8 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TMEM248Q9NWD8 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
TMEM248Q9NWD8 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TMEM248Q9NWD8 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TMEM248Q9NWD8 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.28■□□□□ 0.52
TMEM248Q9NWD8 NUS1P1-201ENST00000446295 882 ntBASIC18.28■□□□□ 0.52
TMEM248Q9NWD8 KRT18P56-201ENST00000507275 550 ntBASIC18.28■□□□□ 0.52
TMEM248Q9NWD8 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.28■□□□□ 0.52
TMEM248Q9NWD8 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.28■□□□□ 0.52
TMEM248Q9NWD8 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.28■□□□□ 0.52
TMEM248Q9NWD8 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TMEM248Q9NWD8 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.28■□□□□ 0.52
TMEM248Q9NWD8 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
TMEM248Q9NWD8 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.28■□□□□ 0.52
TMEM248Q9NWD8 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.28■□□□□ 0.52
TMEM248Q9NWD8 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.28■□□□□ 0.52
TMEM248Q9NWD8 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TMEM248Q9NWD8 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms