Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.52■□□□□ 0.24
UBQLN4Q9NRR5 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
UBQLN4Q9NRR5 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
UBQLN4Q9NRR5 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.52■□□□□ 0.24
UBQLN4Q9NRR5 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
UBQLN4Q9NRR5 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
UBQLN4Q9NRR5 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
UBQLN4Q9NRR5 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.23
UBQLN4Q9NRR5 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
UBQLN4Q9NRR5 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
UBQLN4Q9NRR5 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
UBQLN4Q9NRR5 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
UBQLN4Q9NRR5 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.52■□□□□ 0.23
UBQLN4Q9NRR5 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBQLN4Q9NRR5 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBQLN4Q9NRR5 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBQLN4Q9NRR5 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
UBQLN4Q9NRR5 AL133373.2-201ENST00000623187 2828 ntBASIC16.51■□□□□ 0.23
UBQLN4Q9NRR5 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.51■□□□□ 0.23
UBQLN4Q9NRR5 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBQLN4Q9NRR5 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
UBQLN4Q9NRR5 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
UBQLN4Q9NRR5 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBQLN4Q9NRR5 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
UBQLN4Q9NRR5 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.51■□□□□ 0.23
UBQLN4Q9NRR5 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
UBQLN4Q9NRR5 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBQLN4Q9NRR5 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBQLN4Q9NRR5 AC068880.1-201ENST00000507289 2297 ntBASIC16.51■□□□□ 0.23
UBQLN4Q9NRR5 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
UBQLN4Q9NRR5 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
UBQLN4Q9NRR5 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBQLN4Q9NRR5 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBQLN4Q9NRR5 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBQLN4Q9NRR5 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC16.51■□□□□ 0.23
UBQLN4Q9NRR5 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.51■□□□□ 0.23
UBQLN4Q9NRR5 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
UBQLN4Q9NRR5 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.51■□□□□ 0.23
UBQLN4Q9NRR5 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
UBQLN4Q9NRR5 AC116407.2-201ENST00000613639 860 ntBASIC16.51■□□□□ 0.23
UBQLN4Q9NRR5 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBQLN4Q9NRR5 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBQLN4Q9NRR5 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBQLN4Q9NRR5 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBQLN4Q9NRR5 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
UBQLN4Q9NRR5 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
UBQLN4Q9NRR5 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
UBQLN4Q9NRR5 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.51■□□□□ 0.23
UBQLN4Q9NRR5 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.51■□□□□ 0.23
UBQLN4Q9NRR5 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
UBQLN4Q9NRR5 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBQLN4Q9NRR5 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
UBQLN4Q9NRR5 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
UBQLN4Q9NRR5 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBQLN4Q9NRR5 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBQLN4Q9NRR5 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.5■□□□□ 0.23
UBQLN4Q9NRR5 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBQLN4Q9NRR5 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.5■□□□□ 0.23
UBQLN4Q9NRR5 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
UBQLN4Q9NRR5 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBQLN4Q9NRR5 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
UBQLN4Q9NRR5 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
UBQLN4Q9NRR5 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBQLN4Q9NRR5 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBQLN4Q9NRR5 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBQLN4Q9NRR5 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBQLN4Q9NRR5 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.5■□□□□ 0.23
UBQLN4Q9NRR5 TSPY22P-201ENST00000427496 604 ntBASIC16.5■□□□□ 0.23
UBQLN4Q9NRR5 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBQLN4Q9NRR5 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.5■□□□□ 0.23
UBQLN4Q9NRR5 FAM86EP-206ENST00000510506 987 ntBASIC16.5■□□□□ 0.23
UBQLN4Q9NRR5 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
UBQLN4Q9NRR5 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.5■□□□□ 0.23
UBQLN4Q9NRR5 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.5■□□□□ 0.23
UBQLN4Q9NRR5 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.5■□□□□ 0.23
UBQLN4Q9NRR5 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.5■□□□□ 0.23
UBQLN4Q9NRR5 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.5■□□□□ 0.23
UBQLN4Q9NRR5 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
UBQLN4Q9NRR5 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.5■□□□□ 0.23
UBQLN4Q9NRR5 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
UBQLN4Q9NRR5 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBQLN4Q9NRR5 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.5■□□□□ 0.23
UBQLN4Q9NRR5 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
UBQLN4Q9NRR5 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBQLN4Q9NRR5 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
UBQLN4Q9NRR5 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
UBQLN4Q9NRR5 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBQLN4Q9NRR5 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
UBQLN4Q9NRR5 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.49■□□□□ 0.23
UBQLN4Q9NRR5 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
UBQLN4Q9NRR5 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
UBQLN4Q9NRR5 AC005332.1-201ENST00000577698 1310 ntBASIC16.49■□□□□ 0.23
UBQLN4Q9NRR5 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
UBQLN4Q9NRR5 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
UBQLN4Q9NRR5 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
UBQLN4Q9NRR5 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
UBQLN4Q9NRR5 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
UBQLN4Q9NRR5 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
UBQLN4Q9NRR5 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
UBQLN4Q9NRR5 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms