Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NECTIN3Q9NQS3 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NECTIN3Q9NQS3 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
NECTIN3Q9NQS3 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.22■□□□□ 0.35
NECTIN3Q9NQS3 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
NECTIN3Q9NQS3 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NECTIN3Q9NQS3 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NECTIN3Q9NQS3 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NECTIN3Q9NQS3 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.22■□□□□ 0.35
NECTIN3Q9NQS3 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NECTIN3Q9NQS3 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NECTIN3Q9NQS3 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
NECTIN3Q9NQS3 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
NECTIN3Q9NQS3 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NECTIN3Q9NQS3 AC005332.1-201ENST00000577698 1310 ntBASIC17.21■□□□□ 0.35
NECTIN3Q9NQS3 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.21■□□□□ 0.35
NECTIN3Q9NQS3 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.21■□□□□ 0.35
NECTIN3Q9NQS3 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
NECTIN3Q9NQS3 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NECTIN3Q9NQS3 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.21■□□□□ 0.35
NECTIN3Q9NQS3 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
NECTIN3Q9NQS3 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NECTIN3Q9NQS3 AC124067.4-201ENST00000519691 2379 ntBASIC17.21■□□□□ 0.35
NECTIN3Q9NQS3 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
NECTIN3Q9NQS3 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
NECTIN3Q9NQS3 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.21■□□□□ 0.35
NECTIN3Q9NQS3 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NECTIN3Q9NQS3 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NECTIN3Q9NQS3 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NECTIN3Q9NQS3 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.21■□□□□ 0.35
NECTIN3Q9NQS3 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.21■□□□□ 0.35
NECTIN3Q9NQS3 AL136038.3-201ENST00000561909 1096 ntBASIC17.21■□□□□ 0.35
NECTIN3Q9NQS3 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.21■□□□□ 0.35
NECTIN3Q9NQS3 AL358472.4-201ENST00000633140 710 ntBASIC17.21■□□□□ 0.35
NECTIN3Q9NQS3 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NECTIN3Q9NQS3 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NECTIN3Q9NQS3 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
NECTIN3Q9NQS3 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
NECTIN3Q9NQS3 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NECTIN3Q9NQS3 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NECTIN3Q9NQS3 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
NECTIN3Q9NQS3 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
NECTIN3Q9NQS3 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.34
NECTIN3Q9NQS3 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.21■□□□□ 0.34
NECTIN3Q9NQS3 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
NECTIN3Q9NQS3 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
NECTIN3Q9NQS3 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
NECTIN3Q9NQS3 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
NECTIN3Q9NQS3 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NECTIN3Q9NQS3 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NECTIN3Q9NQS3 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.2■□□□□ 0.34
NECTIN3Q9NQS3 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
NECTIN3Q9NQS3 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
NECTIN3Q9NQS3 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NECTIN3Q9NQS3 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NECTIN3Q9NQS3 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NECTIN3Q9NQS3 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.2■□□□□ 0.34
NECTIN3Q9NQS3 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NECTIN3Q9NQS3 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NECTIN3Q9NQS3 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NECTIN3Q9NQS3 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NECTIN3Q9NQS3 PCED1CP-201ENST00000419887 785 ntBASIC17.2■□□□□ 0.34
NECTIN3Q9NQS3 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.2■□□□□ 0.34
NECTIN3Q9NQS3 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.2■□□□□ 0.34
NECTIN3Q9NQS3 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.2■□□□□ 0.34
NECTIN3Q9NQS3 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.2■□□□□ 0.34
NECTIN3Q9NQS3 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NECTIN3Q9NQS3 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
NECTIN3Q9NQS3 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NECTIN3Q9NQS3 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
NECTIN3Q9NQS3 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
NECTIN3Q9NQS3 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
NECTIN3Q9NQS3 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
NECTIN3Q9NQS3 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NECTIN3Q9NQS3 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NECTIN3Q9NQS3 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.2■□□□□ 0.34
NECTIN3Q9NQS3 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.19■□□□□ 0.34
NECTIN3Q9NQS3 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.19■□□□□ 0.34
NECTIN3Q9NQS3 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
NECTIN3Q9NQS3 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NECTIN3Q9NQS3 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.19■□□□□ 0.34
NECTIN3Q9NQS3 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NECTIN3Q9NQS3 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.19■□□□□ 0.34
NECTIN3Q9NQS3 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NECTIN3Q9NQS3 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NECTIN3Q9NQS3 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
NECTIN3Q9NQS3 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
NECTIN3Q9NQS3 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NECTIN3Q9NQS3 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.19■□□□□ 0.34
NECTIN3Q9NQS3 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
NECTIN3Q9NQS3 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.19■□□□□ 0.34
NECTIN3Q9NQS3 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.19■□□□□ 0.34
NECTIN3Q9NQS3 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
NECTIN3Q9NQS3 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
NECTIN3Q9NQS3 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
NECTIN3Q9NQS3 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NECTIN3Q9NQS3 AC106820.2-201ENST00000563775 3264 ntBASIC17.19■□□□□ 0.34
NECTIN3Q9NQS3 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.19■□□□□ 0.34
NECTIN3Q9NQS3 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NECTIN3Q9NQS3 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms