Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC20.39■□□□□ 0.85
ZFYVE28Q9HCC9 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
ZFYVE28Q9HCC9 TK1-204ENST00000590430 683 ntTSL 3 BASIC20.39■□□□□ 0.85
ZFYVE28Q9HCC9 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC20.39■□□□□ 0.85
ZFYVE28Q9HCC9 AC093512.1-201ENST00000617969 520 ntBASIC20.39■□□□□ 0.85
ZFYVE28Q9HCC9 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC20.39■□□□□ 0.85
ZFYVE28Q9HCC9 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
ZFYVE28Q9HCC9 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.85
ZFYVE28Q9HCC9 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.39■□□□□ 0.85
ZFYVE28Q9HCC9 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.39■□□□□ 0.85
ZFYVE28Q9HCC9 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ZFYVE28Q9HCC9 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ZFYVE28Q9HCC9 ADM-208ENST00000534464 1640 ntTSL 2 BASIC20.38■□□□□ 0.85
ZFYVE28Q9HCC9 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.38■□□□□ 0.85
ZFYVE28Q9HCC9 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
ZFYVE28Q9HCC9 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
ZFYVE28Q9HCC9 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC20.38■□□□□ 0.85
ZFYVE28Q9HCC9 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
ZFYVE28Q9HCC9 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ZFYVE28Q9HCC9 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
ZFYVE28Q9HCC9 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ZFYVE28Q9HCC9 COBL-210ENST00000632460 1941 ntTSL 5 BASIC20.38■□□□□ 0.85
ZFYVE28Q9HCC9 COX5BP2-201ENST00000392354 334 ntBASIC20.38■□□□□ 0.85
ZFYVE28Q9HCC9 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ZFYVE28Q9HCC9 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ZFYVE28Q9HCC9 KRT19P2-202ENST00000557173 1012 ntBASIC20.38■□□□□ 0.85
ZFYVE28Q9HCC9 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC20.38■□□□□ 0.85
ZFYVE28Q9HCC9 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
ZFYVE28Q9HCC9 AC004835.2-201ENST00000603762 682 ntBASIC20.38■□□□□ 0.85
ZFYVE28Q9HCC9 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
ZFYVE28Q9HCC9 AQP6-205ENST00000618286 829 ntTSL 5 BASIC20.38■□□□□ 0.85
ZFYVE28Q9HCC9 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
ZFYVE28Q9HCC9 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ZFYVE28Q9HCC9 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC20.38■□□□□ 0.85
ZFYVE28Q9HCC9 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ZFYVE28Q9HCC9 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
ZFYVE28Q9HCC9 AC132938.6-201ENST00000623828 1655 ntBASIC20.38■□□□□ 0.85
ZFYVE28Q9HCC9 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ZFYVE28Q9HCC9 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
ZFYVE28Q9HCC9 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC20.38■□□□□ 0.85
ZFYVE28Q9HCC9 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ZFYVE28Q9HCC9 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
ZFYVE28Q9HCC9 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.37■□□□□ 0.85
ZFYVE28Q9HCC9 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC20.37■□□□□ 0.85
ZFYVE28Q9HCC9 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ZFYVE28Q9HCC9 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
ZFYVE28Q9HCC9 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ZFYVE28Q9HCC9 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
ZFYVE28Q9HCC9 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
ZFYVE28Q9HCC9 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ZFYVE28Q9HCC9 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ZFYVE28Q9HCC9 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC20.37■□□□□ 0.85
ZFYVE28Q9HCC9 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ZFYVE28Q9HCC9 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ZFYVE28Q9HCC9 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC20.37■□□□□ 0.85
ZFYVE28Q9HCC9 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ZFYVE28Q9HCC9 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC20.37■□□□□ 0.85
ZFYVE28Q9HCC9 LSM12-202ENST00000585388 942 ntTSL 3 BASIC20.37■□□□□ 0.85
ZFYVE28Q9HCC9 AC010507.1-201ENST00000633895 436 ntBASIC20.37■□□□□ 0.85
ZFYVE28Q9HCC9 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ZFYVE28Q9HCC9 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ZFYVE28Q9HCC9 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ZFYVE28Q9HCC9 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC20.37■□□□□ 0.85
ZFYVE28Q9HCC9 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
ZFYVE28Q9HCC9 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ZFYVE28Q9HCC9 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.36■□□□□ 0.85
ZFYVE28Q9HCC9 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ZFYVE28Q9HCC9 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ZFYVE28Q9HCC9 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ZFYVE28Q9HCC9 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ZFYVE28Q9HCC9 NEK7-201ENST00000367383 586 ntTSL 2 BASIC20.36■□□□□ 0.85
ZFYVE28Q9HCC9 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ZFYVE28Q9HCC9 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC20.36■□□□□ 0.85
ZFYVE28Q9HCC9 AC074386.1-202ENST00000463561 864 ntBASIC20.36■□□□□ 0.85
ZFYVE28Q9HCC9 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ZFYVE28Q9HCC9 HLA-J-203ENST00000494367 1087 ntBASIC20.36■□□□□ 0.85
ZFYVE28Q9HCC9 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC20.36■□□□□ 0.85
ZFYVE28Q9HCC9 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC20.36■□□□□ 0.85
ZFYVE28Q9HCC9 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC20.36■□□□□ 0.85
ZFYVE28Q9HCC9 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
ZFYVE28Q9HCC9 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ZFYVE28Q9HCC9 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
ZFYVE28Q9HCC9 AC093484.2-201ENST00000580996 2166 ntBASIC20.36■□□□□ 0.85
ZFYVE28Q9HCC9 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ZFYVE28Q9HCC9 AL353593.2-201ENST00000602529 1483 ntBASIC20.36■□□□□ 0.85
ZFYVE28Q9HCC9 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ZFYVE28Q9HCC9 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.36■□□□□ 0.85
ZFYVE28Q9HCC9 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
ZFYVE28Q9HCC9 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ZFYVE28Q9HCC9 AL049812.1-201ENST00000432563 2267 ntBASIC20.36■□□□□ 0.85
ZFYVE28Q9HCC9 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
ZFYVE28Q9HCC9 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ZFYVE28Q9HCC9 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC20.35■□□□□ 0.85
ZFYVE28Q9HCC9 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.35■□□□□ 0.85
ZFYVE28Q9HCC9 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
ZFYVE28Q9HCC9 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC20.35■□□□□ 0.85
ZFYVE28Q9HCC9 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
ZFYVE28Q9HCC9 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC20.35■□□□□ 0.85
ZFYVE28Q9HCC9 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC20.35■□□□□ 0.85
ZFYVE28Q9HCC9 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms