Protein–RNA interactions for Protein: Q9H9E3

COG4, Conserved oligomeric Golgi complex subunit 4, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COG4Q9H9E3 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
COG4Q9H9E3 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COG4Q9H9E3 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
COG4Q9H9E3 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
COG4Q9H9E3 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COG4Q9H9E3 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
COG4Q9H9E3 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COG4Q9H9E3 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COG4Q9H9E3 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
COG4Q9H9E3 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
COG4Q9H9E3 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
COG4Q9H9E3 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COG4Q9H9E3 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COG4Q9H9E3 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
COG4Q9H9E3 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
COG4Q9H9E3 KRT18P38-201ENST00000449496 1282 ntBASIC18.1■□□□□ 0.49
COG4Q9H9E3 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
COG4Q9H9E3 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.1■□□□□ 0.49
COG4Q9H9E3 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.1■□□□□ 0.49
COG4Q9H9E3 AC009065.1-201ENST00000564055 1225 ntBASIC18.1■□□□□ 0.49
COG4Q9H9E3 LINC01238-205ENST00000567549 1107 ntBASIC18.1■□□□□ 0.49
COG4Q9H9E3 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.1■□□□□ 0.49
COG4Q9H9E3 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
COG4Q9H9E3 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.1■□□□□ 0.49
COG4Q9H9E3 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
COG4Q9H9E3 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COG4Q9H9E3 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
COG4Q9H9E3 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COG4Q9H9E3 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
COG4Q9H9E3 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COG4Q9H9E3 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
COG4Q9H9E3 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COG4Q9H9E3 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COG4Q9H9E3 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COG4Q9H9E3 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
COG4Q9H9E3 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
COG4Q9H9E3 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.09■□□□□ 0.49
COG4Q9H9E3 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COG4Q9H9E3 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.09■□□□□ 0.49
COG4Q9H9E3 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.09■□□□□ 0.49
COG4Q9H9E3 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
COG4Q9H9E3 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.09■□□□□ 0.49
COG4Q9H9E3 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
COG4Q9H9E3 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COG4Q9H9E3 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.09■□□□□ 0.49
COG4Q9H9E3 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
COG4Q9H9E3 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.09■□□□□ 0.49
COG4Q9H9E3 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
COG4Q9H9E3 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
COG4Q9H9E3 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.09■□□□□ 0.49
COG4Q9H9E3 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC18.09■□□□□ 0.49
COG4Q9H9E3 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.09■□□□□ 0.49
COG4Q9H9E3 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COG4Q9H9E3 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
COG4Q9H9E3 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
COG4Q9H9E3 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
COG4Q9H9E3 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
COG4Q9H9E3 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
COG4Q9H9E3 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
COG4Q9H9E3 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
COG4Q9H9E3 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
COG4Q9H9E3 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
COG4Q9H9E3 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
COG4Q9H9E3 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
COG4Q9H9E3 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.08■□□□□ 0.48
COG4Q9H9E3 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.08■□□□□ 0.48
COG4Q9H9E3 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.08■□□□□ 0.48
COG4Q9H9E3 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
COG4Q9H9E3 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
COG4Q9H9E3 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
COG4Q9H9E3 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
COG4Q9H9E3 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.08■□□□□ 0.48
COG4Q9H9E3 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
COG4Q9H9E3 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.08■□□□□ 0.48
COG4Q9H9E3 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
COG4Q9H9E3 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.08■□□□□ 0.48
COG4Q9H9E3 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
COG4Q9H9E3 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
COG4Q9H9E3 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
COG4Q9H9E3 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
COG4Q9H9E3 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COG4Q9H9E3 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COG4Q9H9E3 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC18.07■□□□□ 0.48
COG4Q9H9E3 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COG4Q9H9E3 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.07■□□□□ 0.48
COG4Q9H9E3 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.07■□□□□ 0.48
COG4Q9H9E3 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
COG4Q9H9E3 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.07■□□□□ 0.48
COG4Q9H9E3 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.07■□□□□ 0.48
COG4Q9H9E3 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COG4Q9H9E3 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
COG4Q9H9E3 MIR149-201ENST00000384879 89 ntBASIC18.07■□□□□ 0.48
COG4Q9H9E3 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.07■□□□□ 0.48
COG4Q9H9E3 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
COG4Q9H9E3 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.07■□□□□ 0.48
COG4Q9H9E3 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
COG4Q9H9E3 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COG4Q9H9E3 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.07■□□□□ 0.48
COG4Q9H9E3 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
COG4Q9H9E3 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms