Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
VCX3BQ9H321 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
VCX3BQ9H321 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VCX3BQ9H321 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VCX3BQ9H321 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.12■□□□□ 0.33
VCX3BQ9H321 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
VCX3BQ9H321 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
VCX3BQ9H321 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
VCX3BQ9H321 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
VCX3BQ9H321 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
VCX3BQ9H321 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.11■□□□□ 0.33
VCX3BQ9H321 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
VCX3BQ9H321 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VCX3BQ9H321 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
VCX3BQ9H321 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
VCX3BQ9H321 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VCX3BQ9H321 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
VCX3BQ9H321 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
VCX3BQ9H321 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VCX3BQ9H321 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.11■□□□□ 0.33
VCX3BQ9H321 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
VCX3BQ9H321 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.11■□□□□ 0.33
VCX3BQ9H321 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
VCX3BQ9H321 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC17.11■□□□□ 0.33
VCX3BQ9H321 AC005829.2-201ENST00000571422 1056 ntBASIC17.11■□□□□ 0.33
VCX3BQ9H321 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC17.11■□□□□ 0.33
VCX3BQ9H321 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
VCX3BQ9H321 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
VCX3BQ9H321 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
VCX3BQ9H321 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
VCX3BQ9H321 HTR7P1-201ENST00000538670 1336 ntBASIC17.11■□□□□ 0.33
VCX3BQ9H321 AC005052.1-201ENST00000625181 2492 ntBASIC17.11■□□□□ 0.33
VCX3BQ9H321 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
VCX3BQ9H321 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
VCX3BQ9H321 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VCX3BQ9H321 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC17.11■□□□□ 0.33
VCX3BQ9H321 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.1■□□□□ 0.33
VCX3BQ9H321 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.1■□□□□ 0.33
VCX3BQ9H321 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
VCX3BQ9H321 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VCX3BQ9H321 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VCX3BQ9H321 AL136379.1-201ENST00000623471 2642 ntBASIC17.1■□□□□ 0.33
VCX3BQ9H321 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VCX3BQ9H321 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.1■□□□□ 0.33
VCX3BQ9H321 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VCX3BQ9H321 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC17.1■□□□□ 0.33
VCX3BQ9H321 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VCX3BQ9H321 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
VCX3BQ9H321 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VCX3BQ9H321 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
VCX3BQ9H321 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC17.1■□□□□ 0.33
VCX3BQ9H321 AK1-201ENST00000223836 736 ntTSL 3 BASIC17.1■□□□□ 0.33
VCX3BQ9H321 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VCX3BQ9H321 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VCX3BQ9H321 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VCX3BQ9H321 AP000593.1-201ENST00000393668 712 ntBASIC17.1■□□□□ 0.33
VCX3BQ9H321 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC17.1■□□□□ 0.33
VCX3BQ9H321 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC17.1■□□□□ 0.33
VCX3BQ9H321 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
VCX3BQ9H321 KRT18P14-201ENST00000534205 1250 ntBASIC17.1■□□□□ 0.33
VCX3BQ9H321 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.1■□□□□ 0.33
VCX3BQ9H321 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.1■□□□□ 0.33
VCX3BQ9H321 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
VCX3BQ9H321 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
VCX3BQ9H321 KRT8P3-201ENST00000519669 1449 ntBASIC17.1■□□□□ 0.33
VCX3BQ9H321 AC068338.2-201ENST00000563278 1430 ntBASIC17.1■□□□□ 0.33
VCX3BQ9H321 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.1■□□□□ 0.33
VCX3BQ9H321 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VCX3BQ9H321 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
VCX3BQ9H321 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VCX3BQ9H321 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
VCX3BQ9H321 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.1■□□□□ 0.33
VCX3BQ9H321 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VCX3BQ9H321 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VCX3BQ9H321 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
VCX3BQ9H321 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VCX3BQ9H321 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
VCX3BQ9H321 AL603756.1-201ENST00000606511 2163 ntBASIC17.09■□□□□ 0.33
VCX3BQ9H321 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.09■□□□□ 0.33
VCX3BQ9H321 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC17.09■□□□□ 0.33
VCX3BQ9H321 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VCX3BQ9H321 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VCX3BQ9H321 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC17.09■□□□□ 0.33
VCX3BQ9H321 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC17.09■□□□□ 0.33
VCX3BQ9H321 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VCX3BQ9H321 RPS2P52-201ENST00000469610 820 ntBASIC17.09■□□□□ 0.33
VCX3BQ9H321 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC17.09■□□□□ 0.33
VCX3BQ9H321 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
VCX3BQ9H321 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VCX3BQ9H321 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
VCX3BQ9H321 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
VCX3BQ9H321 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
VCX3BQ9H321 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
VCX3BQ9H321 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
VCX3BQ9H321 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VCX3BQ9H321 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VCX3BQ9H321 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
VCX3BQ9H321 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC17.09■□□□□ 0.33
VCX3BQ9H321 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
VCX3BQ9H321 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms