Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SHANK2-AS3Q9BTD1 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC13.83□□□□□ -0.2
SHANK2-AS3Q9BTD1 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SHANK2-AS3Q9BTD1 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SHANK2-AS3Q9BTD1 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SHANK2-AS3Q9BTD1 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
SHANK2-AS3Q9BTD1 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC13.83□□□□□ -0.2
SHANK2-AS3Q9BTD1 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SHANK2-AS3Q9BTD1 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SHANK2-AS3Q9BTD1 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC13.82□□□□□ -0.2
SHANK2-AS3Q9BTD1 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC13.82□□□□□ -0.2
SHANK2-AS3Q9BTD1 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SHANK2-AS3Q9BTD1 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
SHANK2-AS3Q9BTD1 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
SHANK2-AS3Q9BTD1 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC13.82□□□□□ -0.2
SHANK2-AS3Q9BTD1 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SHANK2-AS3Q9BTD1 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC13.82□□□□□ -0.2
SHANK2-AS3Q9BTD1 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
SHANK2-AS3Q9BTD1 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SHANK2-AS3Q9BTD1 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SHANK2-AS3Q9BTD1 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SHANK2-AS3Q9BTD1 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC13.82□□□□□ -0.2
SHANK2-AS3Q9BTD1 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC13.82□□□□□ -0.2
SHANK2-AS3Q9BTD1 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC13.82□□□□□ -0.2
SHANK2-AS3Q9BTD1 AC128688.1-201ENST00000487626 519 ntBASIC13.82□□□□□ -0.2
SHANK2-AS3Q9BTD1 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SHANK2-AS3Q9BTD1 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC13.82□□□□□ -0.2
SHANK2-AS3Q9BTD1 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC13.82□□□□□ -0.2
SHANK2-AS3Q9BTD1 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC13.82□□□□□ -0.2
SHANK2-AS3Q9BTD1 AC024243.1-201ENST00000609234 778 ntBASIC13.82□□□□□ -0.2
SHANK2-AS3Q9BTD1 AC116407.2-201ENST00000613639 860 ntBASIC13.82□□□□□ -0.2
SHANK2-AS3Q9BTD1 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC13.82□□□□□ -0.2
SHANK2-AS3Q9BTD1 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SHANK2-AS3Q9BTD1 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC13.82□□□□□ -0.2
SHANK2-AS3Q9BTD1 AC092865.7-201ENST00000641832 219 ntBASIC13.82□□□□□ -0.2
SHANK2-AS3Q9BTD1 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
SHANK2-AS3Q9BTD1 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SHANK2-AS3Q9BTD1 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
SHANK2-AS3Q9BTD1 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC13.82□□□□□ -0.2
SHANK2-AS3Q9BTD1 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SHANK2-AS3Q9BTD1 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SHANK2-AS3Q9BTD1 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SHANK2-AS3Q9BTD1 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC13.82□□□□□ -0.2
SHANK2-AS3Q9BTD1 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC13.82□□□□□ -0.2
SHANK2-AS3Q9BTD1 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SHANK2-AS3Q9BTD1 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SHANK2-AS3Q9BTD1 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SHANK2-AS3Q9BTD1 LINC00167-201ENST00000530583 1419 ntBASIC13.81□□□□□ -0.2
SHANK2-AS3Q9BTD1 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC13.81□□□□□ -0.2
SHANK2-AS3Q9BTD1 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SHANK2-AS3Q9BTD1 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
SHANK2-AS3Q9BTD1 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SHANK2-AS3Q9BTD1 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
SHANK2-AS3Q9BTD1 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SHANK2-AS3Q9BTD1 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SHANK2-AS3Q9BTD1 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
SHANK2-AS3Q9BTD1 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SHANK2-AS3Q9BTD1 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SHANK2-AS3Q9BTD1 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SHANK2-AS3Q9BTD1 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC13.81□□□□□ -0.2
SHANK2-AS3Q9BTD1 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC13.81□□□□□ -0.2
SHANK2-AS3Q9BTD1 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SHANK2-AS3Q9BTD1 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SHANK2-AS3Q9BTD1 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC13.81□□□□□ -0.2
SHANK2-AS3Q9BTD1 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SHANK2-AS3Q9BTD1 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SHANK2-AS3Q9BTD1 GAD2-202ENST00000376248 680 ntTSL 5 BASIC13.81□□□□□ -0.2
SHANK2-AS3Q9BTD1 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
SHANK2-AS3Q9BTD1 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC13.81□□□□□ -0.2
SHANK2-AS3Q9BTD1 AC009947.2-201ENST00000444014 672 ntBASIC13.81□□□□□ -0.2
SHANK2-AS3Q9BTD1 AC008550.1-201ENST00000511500 884 ntBASIC13.81□□□□□ -0.2
SHANK2-AS3Q9BTD1 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC13.81□□□□□ -0.2
SHANK2-AS3Q9BTD1 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC13.81□□□□□ -0.2
SHANK2-AS3Q9BTD1 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC13.81□□□□□ -0.2
SHANK2-AS3Q9BTD1 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SHANK2-AS3Q9BTD1 AL512604.3-201ENST00000569583 964 ntBASIC13.81□□□□□ -0.2
SHANK2-AS3Q9BTD1 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC13.81□□□□□ -0.2
SHANK2-AS3Q9BTD1 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SHANK2-AS3Q9BTD1 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC13.81□□□□□ -0.2
SHANK2-AS3Q9BTD1 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
SHANK2-AS3Q9BTD1 GLDC-219ENST00000640208 420 ntTSL 2 BASIC13.81□□□□□ -0.2
SHANK2-AS3Q9BTD1 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
SHANK2-AS3Q9BTD1 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
SHANK2-AS3Q9BTD1 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC13.81□□□□□ -0.2
SHANK2-AS3Q9BTD1 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SHANK2-AS3Q9BTD1 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SHANK2-AS3Q9BTD1 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC13.81□□□□□ -0.2
SHANK2-AS3Q9BTD1 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SHANK2-AS3Q9BTD1 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SHANK2-AS3Q9BTD1 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
SHANK2-AS3Q9BTD1 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SHANK2-AS3Q9BTD1 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SHANK2-AS3Q9BTD1 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
SHANK2-AS3Q9BTD1 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SHANK2-AS3Q9BTD1 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC13.8□□□□□ -0.2
SHANK2-AS3Q9BTD1 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SHANK2-AS3Q9BTD1 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SHANK2-AS3Q9BTD1 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC13.8□□□□□ -0.2
SHANK2-AS3Q9BTD1 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC13.8□□□□□ -0.2
SHANK2-AS3Q9BTD1 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms