Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.06■□□□□ 0
PCGF1Q9BSM1 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
PCGF1Q9BSM1 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PCGF1Q9BSM1 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
PCGF1Q9BSM1 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PCGF1Q9BSM1 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.06■□□□□ 0
PCGF1Q9BSM1 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PCGF1Q9BSM1 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PCGF1Q9BSM1 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PCGF1Q9BSM1 SNCG-201ENST00000348795 684 ntTSL 2 BASIC15.06■□□□□ 0
PCGF1Q9BSM1 TSPY22P-201ENST00000427496 604 ntBASIC15.06■□□□□ 0
PCGF1Q9BSM1 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC15.06■□□□□ 0
PCGF1Q9BSM1 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC15.06■□□□□ 0
PCGF1Q9BSM1 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC15.06■□□□□ 0
PCGF1Q9BSM1 CNP-204ENST00000472031 1019 ntTSL 2 BASIC15.06■□□□□ 0
PCGF1Q9BSM1 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC15.06■□□□□ 0
PCGF1Q9BSM1 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC15.06■□□□□ 0
PCGF1Q9BSM1 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC15.06■□□□□ 0
PCGF1Q9BSM1 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC15.06■□□□□ 0
PCGF1Q9BSM1 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC15.06■□□□□ 0
PCGF1Q9BSM1 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC15.06■□□□□ 0
PCGF1Q9BSM1 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
PCGF1Q9BSM1 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
PCGF1Q9BSM1 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PCGF1Q9BSM1 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PCGF1Q9BSM1 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC15.06■□□□□ 0
PCGF1Q9BSM1 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC15.06■□□□□ 0
PCGF1Q9BSM1 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PCGF1Q9BSM1 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PCGF1Q9BSM1 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC15.06■□□□□ 0
PCGF1Q9BSM1 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC15.06■□□□□ 0
PCGF1Q9BSM1 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC15.06■□□□□ 0
PCGF1Q9BSM1 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PCGF1Q9BSM1 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PCGF1Q9BSM1 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
PCGF1Q9BSM1 EFTUD1P1-204ENST00000560401 1798 ntBASIC15.06■□□□□ 0
PCGF1Q9BSM1 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PCGF1Q9BSM1 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
PCGF1Q9BSM1 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
PCGF1Q9BSM1 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC15.05■□□□□ 0
PCGF1Q9BSM1 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
PCGF1Q9BSM1 AL499627.1-201ENST00000569373 2188 ntBASIC15.05■□□□□ 0
PCGF1Q9BSM1 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
PCGF1Q9BSM1 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
PCGF1Q9BSM1 AC067852.2-201ENST00000590513 2313 ntBASIC15.05■□□□□ 0
PCGF1Q9BSM1 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC15.05■□□□□ 0
PCGF1Q9BSM1 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
PCGF1Q9BSM1 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC15.05■□□□□ -0
PCGF1Q9BSM1 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
PCGF1Q9BSM1 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC15.05■□□□□ -0
PCGF1Q9BSM1 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC15.05■□□□□ -0
PCGF1Q9BSM1 TSSC2-201ENST00000450217 709 ntBASIC15.05■□□□□ -0
PCGF1Q9BSM1 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC15.05■□□□□ -0
PCGF1Q9BSM1 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC15.05■□□□□ -0
PCGF1Q9BSM1 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
PCGF1Q9BSM1 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC15.05■□□□□ -0
PCGF1Q9BSM1 AC024563.2-201ENST00000603282 481 ntBASIC15.05■□□□□ -0
PCGF1Q9BSM1 AC092119.3-201ENST00000612618 583 ntBASIC15.05■□□□□ -0
PCGF1Q9BSM1 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC15.05■□□□□ -0
PCGF1Q9BSM1 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
PCGF1Q9BSM1 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC15.05■□□□□ -0
PCGF1Q9BSM1 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC15.05■□□□□ -0
PCGF1Q9BSM1 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
PCGF1Q9BSM1 MYLKP1-201ENST00000509077 1580 ntBASIC15.05■□□□□ -0
PCGF1Q9BSM1 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC15.05■□□□□ -0
PCGF1Q9BSM1 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC15.05■□□□□ -0
PCGF1Q9BSM1 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
PCGF1Q9BSM1 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC15.05■□□□□ -0
PCGF1Q9BSM1 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PCGF1Q9BSM1 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
PCGF1Q9BSM1 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PCGF1Q9BSM1 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
PCGF1Q9BSM1 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC15.05■□□□□ -0
PCGF1Q9BSM1 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
PCGF1Q9BSM1 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC15.04■□□□□ -0
PCGF1Q9BSM1 AC126763.1-201ENST00000552015 2118 ntBASIC15.04■□□□□ -0
PCGF1Q9BSM1 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC15.04■□□□□ -0
PCGF1Q9BSM1 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC15.04■□□□□ -0
PCGF1Q9BSM1 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC15.04■□□□□ -0
PCGF1Q9BSM1 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC15.04■□□□□ -0
PCGF1Q9BSM1 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
PCGF1Q9BSM1 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC15.04■□□□□ -0
PCGF1Q9BSM1 Z83836.1-201ENST00000624605 1642 ntBASIC15.04■□□□□ -0
PCGF1Q9BSM1 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PCGF1Q9BSM1 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PCGF1Q9BSM1 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PCGF1Q9BSM1 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PCGF1Q9BSM1 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC15.04■□□□□ -0
PCGF1Q9BSM1 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
PCGF1Q9BSM1 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PCGF1Q9BSM1 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC15.04■□□□□ -0
PCGF1Q9BSM1 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC15.04■□□□□ -0
PCGF1Q9BSM1 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC15.04■□□□□ -0
PCGF1Q9BSM1 KRT8P26-201ENST00000534154 1276 ntBASIC15.04■□□□□ -0
PCGF1Q9BSM1 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC15.04■□□□□ -0
PCGF1Q9BSM1 RNF126P1-202ENST00000569893 925 ntBASIC15.04■□□□□ -0
PCGF1Q9BSM1 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
PCGF1Q9BSM1 WDR6-223ENST00000627177 207 ntTSL 2 BASIC15.04■□□□□ -0
PCGF1Q9BSM1 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC15.04■□□□□ -0
PCGF1Q9BSM1 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms