Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NPAS2Q99743 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.58■□□□□ 0.4
NPAS2Q99743 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.58■□□□□ 0.4
NPAS2Q99743 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.58■□□□□ 0.4
NPAS2Q99743 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.58■□□□□ 0.4
NPAS2Q99743 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NPAS2Q99743 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
NPAS2Q99743 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
NPAS2Q99743 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.58■□□□□ 0.4
NPAS2Q99743 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NPAS2Q99743 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NPAS2Q99743 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NPAS2Q99743 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NPAS2Q99743 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NPAS2Q99743 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
NPAS2Q99743 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NPAS2Q99743 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NPAS2Q99743 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
NPAS2Q99743 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.58■□□□□ 0.4
NPAS2Q99743 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NPAS2Q99743 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NPAS2Q99743 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NPAS2Q99743 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NPAS2Q99743 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
NPAS2Q99743 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NPAS2Q99743 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
NPAS2Q99743 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
NPAS2Q99743 AC022211.2-201ENST00000585075 2527 ntBASIC17.57■□□□□ 0.4
NPAS2Q99743 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NPAS2Q99743 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NPAS2Q99743 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.57■□□□□ 0.4
NPAS2Q99743 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.57■□□□□ 0.4
NPAS2Q99743 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.57■□□□□ 0.4
NPAS2Q99743 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NPAS2Q99743 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NPAS2Q99743 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.57■□□□□ 0.4
NPAS2Q99743 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NPAS2Q99743 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.57■□□□□ 0.4
NPAS2Q99743 NTF6B-201ENST00000591913 560 ntBASIC17.57■□□□□ 0.4
NPAS2Q99743 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.57■□□□□ 0.4
NPAS2Q99743 AC139887.4-201ENST00000607877 719 ntBASIC17.57■□□□□ 0.4
NPAS2Q99743 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.57■□□□□ 0.4
NPAS2Q99743 AC141257.4-201ENST00000634557 245 ntBASIC17.57■□□□□ 0.4
NPAS2Q99743 AC136944.6-201ENST00000634818 245 ntBASIC17.57■□□□□ 0.4
NPAS2Q99743 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.57■□□□□ 0.4
NPAS2Q99743 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.57■□□□□ 0.4
NPAS2Q99743 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.57■□□□□ 0.4
NPAS2Q99743 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NPAS2Q99743 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NPAS2Q99743 AL109659.2-201ENST00000606809 1674 ntBASIC17.57■□□□□ 0.4
NPAS2Q99743 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NPAS2Q99743 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
NPAS2Q99743 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
NPAS2Q99743 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.57■□□□□ 0.4
NPAS2Q99743 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.57■□□□□ 0.4
NPAS2Q99743 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.57■□□□□ 0.4
NPAS2Q99743 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NPAS2Q99743 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NPAS2Q99743 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
NPAS2Q99743 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
NPAS2Q99743 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
NPAS2Q99743 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.56■□□□□ 0.4
NPAS2Q99743 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
NPAS2Q99743 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
NPAS2Q99743 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.56■□□□□ 0.4
NPAS2Q99743 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NPAS2Q99743 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NPAS2Q99743 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NPAS2Q99743 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NPAS2Q99743 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NPAS2Q99743 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NPAS2Q99743 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NPAS2Q99743 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NPAS2Q99743 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NPAS2Q99743 ARMC10P1-201ENST00000313754 855 ntBASIC17.56■□□□□ 0.4
NPAS2Q99743 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NPAS2Q99743 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
NPAS2Q99743 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
NPAS2Q99743 AK4P3-201ENST00000418260 669 ntBASIC17.56■□□□□ 0.4
NPAS2Q99743 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
NPAS2Q99743 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
NPAS2Q99743 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
NPAS2Q99743 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
NPAS2Q99743 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.56■□□□□ 0.4
NPAS2Q99743 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.56■□□□□ 0.4
NPAS2Q99743 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.56■□□□□ 0.4
NPAS2Q99743 MIR4674-201ENST00000582457 87 ntBASIC17.56■□□□□ 0.4
NPAS2Q99743 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.56■□□□□ 0.4
NPAS2Q99743 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NPAS2Q99743 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.56■□□□□ 0.4
NPAS2Q99743 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
NPAS2Q99743 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NPAS2Q99743 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
NPAS2Q99743 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NPAS2Q99743 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
NPAS2Q99743 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NPAS2Q99743 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
NPAS2Q99743 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.56■□□□□ 0.4
NPAS2Q99743 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NPAS2Q99743 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms