Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.56■□□□□ 0.56
CDCA3Q99618 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.56■□□□□ 0.56
CDCA3Q99618 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.56■□□□□ 0.56
CDCA3Q99618 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDCA3Q99618 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
CDCA3Q99618 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDCA3Q99618 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CDCA3Q99618 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDCA3Q99618 SIRPAP1-201ENST00000448467 1770 ntBASIC18.55■□□□□ 0.56
CDCA3Q99618 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDCA3Q99618 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.55■□□□□ 0.56
CDCA3Q99618 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CDCA3Q99618 ANO7L1-203ENST00000602586 1720 ntBASIC18.55■□□□□ 0.56
CDCA3Q99618 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CDCA3Q99618 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDCA3Q99618 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDCA3Q99618 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDCA3Q99618 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDCA3Q99618 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CDCA3Q99618 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDCA3Q99618 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDCA3Q99618 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDCA3Q99618 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDCA3Q99618 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDCA3Q99618 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC18.55■□□□□ 0.56
CDCA3Q99618 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC18.55■□□□□ 0.56
CDCA3Q99618 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC18.55■□□□□ 0.56
CDCA3Q99618 RIN3-211ENST00000557762 517 ntTSL 3 BASIC18.55■□□□□ 0.56
CDCA3Q99618 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
CDCA3Q99618 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDCA3Q99618 AC106028.4-201ENST00000614509 607 ntBASIC18.55■□□□□ 0.56
CDCA3Q99618 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC18.55■□□□□ 0.56
CDCA3Q99618 AC004877.2-201ENST00000623941 599 ntBASIC18.55■□□□□ 0.56
CDCA3Q99618 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC18.55■□□□□ 0.56
CDCA3Q99618 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDCA3Q99618 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDCA3Q99618 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDCA3Q99618 AC148477.5-201ENST00000625164 1645 ntBASIC18.55■□□□□ 0.56
CDCA3Q99618 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDCA3Q99618 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDCA3Q99618 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDCA3Q99618 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CDCA3Q99618 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
CDCA3Q99618 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CDCA3Q99618 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CDCA3Q99618 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CDCA3Q99618 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDCA3Q99618 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.54■□□□□ 0.56
CDCA3Q99618 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.54■□□□□ 0.56
CDCA3Q99618 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CDCA3Q99618 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CDCA3Q99618 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDCA3Q99618 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.54■□□□□ 0.56
CDCA3Q99618 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDCA3Q99618 AC005332.7-201ENST00000614046 2005 ntBASIC18.54■□□□□ 0.56
CDCA3Q99618 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDCA3Q99618 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDCA3Q99618 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CDCA3Q99618 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDCA3Q99618 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CDCA3Q99618 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDCA3Q99618 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDCA3Q99618 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
CDCA3Q99618 AP002414.1-201ENST00000391405 1147 ntBASIC18.54■□□□□ 0.56
CDCA3Q99618 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDCA3Q99618 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC18.54■□□□□ 0.56
CDCA3Q99618 DDT-204ENST00000404092 805 ntTSL 3 BASIC18.54■□□□□ 0.56
CDCA3Q99618 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC18.54■□□□□ 0.56
CDCA3Q99618 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC18.54■□□□□ 0.56
CDCA3Q99618 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC18.54■□□□□ 0.56
CDCA3Q99618 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC18.54■□□□□ 0.56
CDCA3Q99618 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDCA3Q99618 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.54■□□□□ 0.56
CDCA3Q99618 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC18.54■□□□□ 0.56
CDCA3Q99618 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC18.54■□□□□ 0.56
CDCA3Q99618 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CDCA3Q99618 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC18.54■□□□□ 0.56
CDCA3Q99618 AL031432.2-201ENST00000566714 459 ntBASIC18.54■□□□□ 0.56
CDCA3Q99618 AL928711.1-201ENST00000570165 459 ntBASIC18.54■□□□□ 0.56
CDCA3Q99618 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.54■□□□□ 0.56
CDCA3Q99618 AC010507.1-201ENST00000633895 436 ntBASIC18.54■□□□□ 0.56
CDCA3Q99618 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CDCA3Q99618 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.54■□□□□ 0.56
CDCA3Q99618 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CDCA3Q99618 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDCA3Q99618 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CDCA3Q99618 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC18.54■□□□□ 0.56
CDCA3Q99618 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDCA3Q99618 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDCA3Q99618 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDCA3Q99618 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDCA3Q99618 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDCA3Q99618 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDCA3Q99618 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CDCA3Q99618 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDCA3Q99618 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDCA3Q99618 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDCA3Q99618 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC18.53■□□□□ 0.56
CDCA3Q99618 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.53■□□□□ 0.56
CDCA3Q99618 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms