Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 AC068880.1-201ENST00000507289 2297 ntBASIC17.47■□□□□ 0.39
PKP4Q99569 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PKP4Q99569 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PKP4Q99569 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.47■□□□□ 0.39
PKP4Q99569 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PKP4Q99569 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PKP4Q99569 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PKP4Q99569 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
PKP4Q99569 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
PKP4Q99569 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PKP4Q99569 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PKP4Q99569 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.47■□□□□ 0.39
PKP4Q99569 AC068472.1-201ENST00000474589 881 ntBASIC17.47■□□□□ 0.39
PKP4Q99569 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.47■□□□□ 0.39
PKP4Q99569 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PKP4Q99569 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PKP4Q99569 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PKP4Q99569 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PKP4Q99569 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
PKP4Q99569 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PKP4Q99569 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PKP4Q99569 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PKP4Q99569 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.47■□□□□ 0.39
PKP4Q99569 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
PKP4Q99569 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PKP4Q99569 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PKP4Q99569 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PKP4Q99569 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.46■□□□□ 0.39
PKP4Q99569 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.39
PKP4Q99569 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PKP4Q99569 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PKP4Q99569 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.46■□□□□ 0.39
PKP4Q99569 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.46■□□□□ 0.39
PKP4Q99569 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
PKP4Q99569 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.46■□□□□ 0.39
PKP4Q99569 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PKP4Q99569 IER3-202ENST00000376377 1350 ntBASIC17.46■□□□□ 0.39
PKP4Q99569 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PKP4Q99569 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.46■□□□□ 0.39
PKP4Q99569 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.46■□□□□ 0.39
PKP4Q99569 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.39
PKP4Q99569 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.46■□□□□ 0.39
PKP4Q99569 KRT8P26-201ENST00000534154 1276 ntBASIC17.46■□□□□ 0.39
PKP4Q99569 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.46■□□□□ 0.39
PKP4Q99569 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.46■□□□□ 0.39
PKP4Q99569 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.46■□□□□ 0.39
PKP4Q99569 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.46■□□□□ 0.39
PKP4Q99569 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.46■□□□□ 0.39
PKP4Q99569 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PKP4Q99569 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
PKP4Q99569 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.46■□□□□ 0.39
PKP4Q99569 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
PKP4Q99569 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
PKP4Q99569 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PKP4Q99569 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PKP4Q99569 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
PKP4Q99569 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
PKP4Q99569 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
PKP4Q99569 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.46■□□□□ 0.38
PKP4Q99569 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
PKP4Q99569 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.46■□□□□ 0.38
PKP4Q99569 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
PKP4Q99569 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
PKP4Q99569 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
PKP4Q99569 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PKP4Q99569 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.45■□□□□ 0.38
PKP4Q99569 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PKP4Q99569 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PKP4Q99569 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
PKP4Q99569 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
PKP4Q99569 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PKP4Q99569 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PKP4Q99569 MTCL1P1-201ENST00000446207 792 ntBASIC17.45■□□□□ 0.38
PKP4Q99569 AC112698.1-201ENST00000510299 916 ntBASIC17.45■□□□□ 0.38
PKP4Q99569 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.45■□□□□ 0.38
PKP4Q99569 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PKP4Q99569 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
PKP4Q99569 AL358472.4-201ENST00000633140 710 ntBASIC17.45■□□□□ 0.38
PKP4Q99569 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PKP4Q99569 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
PKP4Q99569 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
PKP4Q99569 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PKP4Q99569 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.45■□□□□ 0.38
PKP4Q99569 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.45■□□□□ 0.38
PKP4Q99569 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PKP4Q99569 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PKP4Q99569 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PKP4Q99569 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
PKP4Q99569 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PKP4Q99569 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.45■□□□□ 0.38
PKP4Q99569 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.45■□□□□ 0.38
PKP4Q99569 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
PKP4Q99569 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PKP4Q99569 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PKP4Q99569 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
PKP4Q99569 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
PKP4Q99569 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PKP4Q99569 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
PKP4Q99569 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
PKP4Q99569 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms