Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
S1PR3Q99500 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC14.84□□□□□ -0.03
S1PR3Q99500 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
S1PR3Q99500 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC14.84□□□□□ -0.03
S1PR3Q99500 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
S1PR3Q99500 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
S1PR3Q99500 AC093010.1-201ENST00000473625 1624 ntBASIC14.84□□□□□ -0.03
S1PR3Q99500 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC14.84□□□□□ -0.03
S1PR3Q99500 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC14.84□□□□□ -0.03
S1PR3Q99500 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
S1PR3Q99500 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
S1PR3Q99500 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
S1PR3Q99500 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
S1PR3Q99500 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
S1PR3Q99500 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
S1PR3Q99500 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
S1PR3Q99500 LGALS8-AS1-201ENST00000487567 1457 ntBASIC14.83□□□□□ -0.03
S1PR3Q99500 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC14.83□□□□□ -0.04
S1PR3Q99500 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
S1PR3Q99500 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
S1PR3Q99500 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
S1PR3Q99500 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
S1PR3Q99500 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
S1PR3Q99500 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
S1PR3Q99500 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC14.83□□□□□ -0.04
S1PR3Q99500 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC14.83□□□□□ -0.04
S1PR3Q99500 AC034232.1-201ENST00000506026 1064 ntBASIC14.83□□□□□ -0.04
S1PR3Q99500 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC14.83□□□□□ -0.04
S1PR3Q99500 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC14.83□□□□□ -0.04
S1PR3Q99500 PPOX-219ENST00000544598 813 ntTSL 2 BASIC14.83□□□□□ -0.04
S1PR3Q99500 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC14.83□□□□□ -0.04
S1PR3Q99500 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
S1PR3Q99500 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
S1PR3Q99500 AP000997.3-201ENST00000623333 2250 ntBASIC14.83□□□□□ -0.04
S1PR3Q99500 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
S1PR3Q99500 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
S1PR3Q99500 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
S1PR3Q99500 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
S1PR3Q99500 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
S1PR3Q99500 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
S1PR3Q99500 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
S1PR3Q99500 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
S1PR3Q99500 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
S1PR3Q99500 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
S1PR3Q99500 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
S1PR3Q99500 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
S1PR3Q99500 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC14.83□□□□□ -0.04
S1PR3Q99500 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
S1PR3Q99500 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC14.82□□□□□ -0.04
S1PR3Q99500 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
S1PR3Q99500 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
S1PR3Q99500 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC14.82□□□□□ -0.04
S1PR3Q99500 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC14.82□□□□□ -0.04
S1PR3Q99500 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
S1PR3Q99500 AL024508.2-201ENST00000607749 1894 ntBASIC14.82□□□□□ -0.04
S1PR3Q99500 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
S1PR3Q99500 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC14.82□□□□□ -0.04
S1PR3Q99500 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
S1PR3Q99500 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
S1PR3Q99500 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
S1PR3Q99500 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
S1PR3Q99500 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC14.82□□□□□ -0.04
S1PR3Q99500 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
S1PR3Q99500 LINC01126-201ENST00000623515 1646 ntBASIC14.82□□□□□ -0.04
S1PR3Q99500 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
S1PR3Q99500 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
S1PR3Q99500 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
S1PR3Q99500 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC14.82□□□□□ -0.04
S1PR3Q99500 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
S1PR3Q99500 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
S1PR3Q99500 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
S1PR3Q99500 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC14.82□□□□□ -0.04
S1PR3Q99500 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC14.82□□□□□ -0.04
S1PR3Q99500 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
S1PR3Q99500 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
S1PR3Q99500 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
S1PR3Q99500 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC14.82□□□□□ -0.04
S1PR3Q99500 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC14.82□□□□□ -0.04
S1PR3Q99500 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
S1PR3Q99500 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
S1PR3Q99500 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC14.82□□□□□ -0.04
S1PR3Q99500 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
S1PR3Q99500 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC14.82□□□□□ -0.04
S1PR3Q99500 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
S1PR3Q99500 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
S1PR3Q99500 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
S1PR3Q99500 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
S1PR3Q99500 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
S1PR3Q99500 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
S1PR3Q99500 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
S1PR3Q99500 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
S1PR3Q99500 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
S1PR3Q99500 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
S1PR3Q99500 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
S1PR3Q99500 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
S1PR3Q99500 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
S1PR3Q99500 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
S1PR3Q99500 GNE-204ENST00000539208 2190 ntTSL 2 BASIC14.81□□□□□ -0.04
S1PR3Q99500 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
S1PR3Q99500 FZD10-202ENST00000539839 3282 ntBASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms