Protein–RNA interactions for Protein: Q96QV6

HIST1H2AA, Histone H2A type 1-A, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2AAQ96QV6 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HIST1H2AAQ96QV6 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
HIST1H2AAQ96QV6 AL137013.1-201ENST00000432946 1228 ntBASIC15.58■□□□□ 0.08
HIST1H2AAQ96QV6 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC15.58■□□□□ 0.08
HIST1H2AAQ96QV6 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
HIST1H2AAQ96QV6 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC15.58■□□□□ 0.08
HIST1H2AAQ96QV6 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC15.58■□□□□ 0.08
HIST1H2AAQ96QV6 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC15.58■□□□□ 0.08
HIST1H2AAQ96QV6 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
HIST1H2AAQ96QV6 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC15.58■□□□□ 0.08
HIST1H2AAQ96QV6 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HIST1H2AAQ96QV6 NOC2LP2-201ENST00000407594 1944 ntBASIC15.58■□□□□ 0.08
HIST1H2AAQ96QV6 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HIST1H2AAQ96QV6 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
HIST1H2AAQ96QV6 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
HIST1H2AAQ96QV6 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
HIST1H2AAQ96QV6 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HIST1H2AAQ96QV6 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
HIST1H2AAQ96QV6 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC15.58■□□□□ 0.08
HIST1H2AAQ96QV6 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HIST1H2AAQ96QV6 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC15.58■□□□□ 0.08
HIST1H2AAQ96QV6 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HIST1H2AAQ96QV6 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
HIST1H2AAQ96QV6 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HIST1H2AAQ96QV6 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HIST1H2AAQ96QV6 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HIST1H2AAQ96QV6 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC15.57■□□□□ 0.08
HIST1H2AAQ96QV6 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HIST1H2AAQ96QV6 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
HIST1H2AAQ96QV6 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
HIST1H2AAQ96QV6 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HIST1H2AAQ96QV6 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
HIST1H2AAQ96QV6 PXK-206ENST00000463280 2825 ntTSL 2 BASIC15.57■□□□□ 0.08
HIST1H2AAQ96QV6 STK4-201ENST00000372801 2038 ntTSL 2 BASIC15.57■□□□□ 0.08
HIST1H2AAQ96QV6 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HIST1H2AAQ96QV6 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HIST1H2AAQ96QV6 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HIST1H2AAQ96QV6 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC15.57■□□□□ 0.08
HIST1H2AAQ96QV6 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HIST1H2AAQ96QV6 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HIST1H2AAQ96QV6 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC15.57■□□□□ 0.08
HIST1H2AAQ96QV6 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC15.57■□□□□ 0.08
HIST1H2AAQ96QV6 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC15.57■□□□□ 0.08
HIST1H2AAQ96QV6 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
HIST1H2AAQ96QV6 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC15.57■□□□□ 0.08
HIST1H2AAQ96QV6 RPS20-210ENST00000523936 899 ntTSL 2 BASIC15.57■□□□□ 0.08
HIST1H2AAQ96QV6 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC15.57■□□□□ 0.08
HIST1H2AAQ96QV6 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
HIST1H2AAQ96QV6 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
HIST1H2AAQ96QV6 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
HIST1H2AAQ96QV6 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HIST1H2AAQ96QV6 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HIST1H2AAQ96QV6 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HIST1H2AAQ96QV6 PBK-203ENST00000522944 1499 ntTSL 2 BASIC15.57■□□□□ 0.08
HIST1H2AAQ96QV6 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HIST1H2AAQ96QV6 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
HIST1H2AAQ96QV6 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC15.57■□□□□ 0.08
HIST1H2AAQ96QV6 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HIST1H2AAQ96QV6 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HIST1H2AAQ96QV6 LINC01126-201ENST00000623515 1646 ntBASIC15.57■□□□□ 0.08
HIST1H2AAQ96QV6 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HIST1H2AAQ96QV6 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC15.57■□□□□ 0.08
HIST1H2AAQ96QV6 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
HIST1H2AAQ96QV6 GATB-213ENST00000515812 1893 ntTSL 5 BASIC15.57■□□□□ 0.08
HIST1H2AAQ96QV6 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC15.57■□□□□ 0.08
HIST1H2AAQ96QV6 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HIST1H2AAQ96QV6 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HIST1H2AAQ96QV6 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
HIST1H2AAQ96QV6 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC15.56■□□□□ 0.08
HIST1H2AAQ96QV6 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC15.56■□□□□ 0.08
HIST1H2AAQ96QV6 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
HIST1H2AAQ96QV6 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HIST1H2AAQ96QV6 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HIST1H2AAQ96QV6 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
HIST1H2AAQ96QV6 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.56■□□□□ 0.08
HIST1H2AAQ96QV6 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HIST1H2AAQ96QV6 ANKRD20A18P-201ENST00000359341 492 ntBASIC15.56■□□□□ 0.08
HIST1H2AAQ96QV6 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HIST1H2AAQ96QV6 COX11P1-201ENST00000489116 835 ntBASIC15.56■□□□□ 0.08
HIST1H2AAQ96QV6 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC15.56■□□□□ 0.08
HIST1H2AAQ96QV6 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC15.56■□□□□ 0.08
HIST1H2AAQ96QV6 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC15.56■□□□□ 0.08
HIST1H2AAQ96QV6 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC15.56■□□□□ 0.08
HIST1H2AAQ96QV6 AL157888.1-201ENST00000631930 593 ntBASIC15.56■□□□□ 0.08
HIST1H2AAQ96QV6 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HIST1H2AAQ96QV6 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HIST1H2AAQ96QV6 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HIST1H2AAQ96QV6 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HIST1H2AAQ96QV6 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
HIST1H2AAQ96QV6 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HIST1H2AAQ96QV6 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HIST1H2AAQ96QV6 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC15.56■□□□□ 0.08
HIST1H2AAQ96QV6 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
HIST1H2AAQ96QV6 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
HIST1H2AAQ96QV6 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC15.56■□□□□ 0.08
HIST1H2AAQ96QV6 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC15.56■□□□□ 0.08
HIST1H2AAQ96QV6 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HIST1H2AAQ96QV6 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
HIST1H2AAQ96QV6 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HIST1H2AAQ96QV6 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms