Protein–RNA interactions for Protein: Q96M96

FGD4, FYVE, RhoGEF and PH domain-containing protein 4, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4Q96M96 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
FGD4Q96M96 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC20.24■□□□□ 0.83
FGD4Q96M96 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC20.24■□□□□ 0.83
FGD4Q96M96 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC20.24■□□□□ 0.83
FGD4Q96M96 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC20.24■□□□□ 0.83
FGD4Q96M96 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
FGD4Q96M96 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC20.24■□□□□ 0.83
FGD4Q96M96 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC20.24■□□□□ 0.83
FGD4Q96M96 AL356488.2-201ENST00000602755 427 ntBASIC20.24■□□□□ 0.83
FGD4Q96M96 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
FGD4Q96M96 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.24■□□□□ 0.83
FGD4Q96M96 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.24■□□□□ 0.83
FGD4Q96M96 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC20.24■□□□□ 0.83
FGD4Q96M96 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC20.24■□□□□ 0.83
FGD4Q96M96 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
FGD4Q96M96 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
FGD4Q96M96 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
FGD4Q96M96 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
FGD4Q96M96 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
FGD4Q96M96 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC20.24■□□□□ 0.83
FGD4Q96M96 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
FGD4Q96M96 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
FGD4Q96M96 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
FGD4Q96M96 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
FGD4Q96M96 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
FGD4Q96M96 TBC1D3P5-201ENST00000579401 1545 ntBASIC20.23■□□□□ 0.83
FGD4Q96M96 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
FGD4Q96M96 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
FGD4Q96M96 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC20.23■□□□□ 0.83
FGD4Q96M96 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
FGD4Q96M96 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
FGD4Q96M96 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC20.23■□□□□ 0.83
FGD4Q96M96 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
FGD4Q96M96 SRP19-202ENST00000445150 833 ntTSL 2 BASIC20.23■□□□□ 0.83
FGD4Q96M96 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC20.23■□□□□ 0.83
FGD4Q96M96 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC20.23■□□□□ 0.83
FGD4Q96M96 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC20.23■□□□□ 0.83
FGD4Q96M96 AC105339.3-201ENST00000560043 636 ntBASIC20.23■□□□□ 0.83
FGD4Q96M96 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC20.23■□□□□ 0.83
FGD4Q96M96 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC20.23■□□□□ 0.83
FGD4Q96M96 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC20.23■□□□□ 0.83
FGD4Q96M96 AC027601.4-201ENST00000611259 610 ntBASIC20.23■□□□□ 0.83
FGD4Q96M96 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
FGD4Q96M96 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
FGD4Q96M96 SP100-208ENST00000427101 1922 ntTSL 2 BASIC20.23■□□□□ 0.83
FGD4Q96M96 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC20.23■□□□□ 0.83
FGD4Q96M96 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
FGD4Q96M96 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
FGD4Q96M96 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
FGD4Q96M96 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
FGD4Q96M96 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
FGD4Q96M96 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC20.22■□□□□ 0.83
FGD4Q96M96 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
FGD4Q96M96 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC20.22■□□□□ 0.83
FGD4Q96M96 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
FGD4Q96M96 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC20.22■□□□□ 0.83
FGD4Q96M96 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC20.22■□□□□ 0.83
FGD4Q96M96 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
FGD4Q96M96 AC122714.2-201ENST00000502787 707 ntBASIC20.22■□□□□ 0.83
FGD4Q96M96 NMU-202ENST00000505262 693 ntTSL 3 BASIC20.22■□□□□ 0.83
FGD4Q96M96 UNC93B6-202ENST00000528242 690 ntBASIC20.22■□□□□ 0.83
FGD4Q96M96 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
FGD4Q96M96 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
FGD4Q96M96 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
FGD4Q96M96 AC004817.3-201ENST00000602957 2129 ntBASIC20.22■□□□□ 0.83
FGD4Q96M96 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC20.22■□□□□ 0.83
FGD4Q96M96 FAM197Y3-203ENST00000618346 717 ntBASIC20.22■□□□□ 0.83
FGD4Q96M96 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
FGD4Q96M96 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
FGD4Q96M96 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.22■□□□□ 0.83
FGD4Q96M96 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
FGD4Q96M96 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
FGD4Q96M96 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
FGD4Q96M96 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
FGD4Q96M96 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
FGD4Q96M96 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
FGD4Q96M96 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
FGD4Q96M96 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
FGD4Q96M96 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
FGD4Q96M96 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC20.21■□□□□ 0.83
FGD4Q96M96 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
FGD4Q96M96 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
FGD4Q96M96 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
FGD4Q96M96 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
FGD4Q96M96 MIR1233-2-201ENST00000408138 82 ntBASIC20.21■□□□□ 0.83
FGD4Q96M96 MIR1233-1-201ENST00000408722 82 ntBASIC20.21■□□□□ 0.83
FGD4Q96M96 KRT18P27-201ENST00000427733 1299 ntBASIC20.21■□□□□ 0.83
FGD4Q96M96 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC20.21■□□□□ 0.83
FGD4Q96M96 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC20.21■□□□□ 0.83
FGD4Q96M96 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC20.21■□□□□ 0.83
FGD4Q96M96 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC20.21■□□□□ 0.83
FGD4Q96M96 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC20.21■□□□□ 0.83
FGD4Q96M96 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
FGD4Q96M96 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
FGD4Q96M96 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
FGD4Q96M96 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
FGD4Q96M96 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
FGD4Q96M96 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
FGD4Q96M96 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC20.21■□□□□ 0.83
FGD4Q96M96 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms