Protein–RNA interactions for Protein: Q96LR5

UBE2E2, Ubiquitin-conjugating enzyme E2 E2, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E2Q96LR5 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC13.89□□□□□ -0.19
UBE2E2Q96LR5 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC13.89□□□□□ -0.19
UBE2E2Q96LR5 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
UBE2E2Q96LR5 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
UBE2E2Q96LR5 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
UBE2E2Q96LR5 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
UBE2E2Q96LR5 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
UBE2E2Q96LR5 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
UBE2E2Q96LR5 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
UBE2E2Q96LR5 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
UBE2E2Q96LR5 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
UBE2E2Q96LR5 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC13.89□□□□□ -0.19
UBE2E2Q96LR5 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBE2E2Q96LR5 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
UBE2E2Q96LR5 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBE2E2Q96LR5 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
UBE2E2Q96LR5 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
UBE2E2Q96LR5 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
UBE2E2Q96LR5 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBE2E2Q96LR5 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBE2E2Q96LR5 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBE2E2Q96LR5 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBE2E2Q96LR5 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC13.88□□□□□ -0.19
UBE2E2Q96LR5 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC13.88□□□□□ -0.19
UBE2E2Q96LR5 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
UBE2E2Q96LR5 SP100-208ENST00000427101 1922 ntTSL 2 BASIC13.88□□□□□ -0.19
UBE2E2Q96LR5 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBE2E2Q96LR5 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC13.88□□□□□ -0.19
UBE2E2Q96LR5 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC13.88□□□□□ -0.19
UBE2E2Q96LR5 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBE2E2Q96LR5 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBE2E2Q96LR5 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBE2E2Q96LR5 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
UBE2E2Q96LR5 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBE2E2Q96LR5 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
UBE2E2Q96LR5 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBE2E2Q96LR5 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
UBE2E2Q96LR5 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBE2E2Q96LR5 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
UBE2E2Q96LR5 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC13.88□□□□□ -0.19
UBE2E2Q96LR5 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC13.88□□□□□ -0.19
UBE2E2Q96LR5 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC13.88□□□□□ -0.19
UBE2E2Q96LR5 BET1L-206ENST00000486280 665 ntTSL 3 BASIC13.88□□□□□ -0.19
UBE2E2Q96LR5 KRT18P31-201ENST00000506277 1292 ntBASIC13.88□□□□□ -0.19
UBE2E2Q96LR5 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC13.88□□□□□ -0.19
UBE2E2Q96LR5 TPM1-218ENST00000559281 851 ntTSL 5 BASIC13.88□□□□□ -0.19
UBE2E2Q96LR5 COX5A-204ENST00000567270 579 ntTSL 3 BASIC13.88□□□□□ -0.19
UBE2E2Q96LR5 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC13.88□□□□□ -0.19
UBE2E2Q96LR5 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC13.88□□□□□ -0.19
UBE2E2Q96LR5 AC005336.2-201ENST00000593183 939 ntBASIC13.88□□□□□ -0.19
UBE2E2Q96LR5 AC138894.3-201ENST00000603787 634 ntBASIC13.88□□□□□ -0.19
UBE2E2Q96LR5 AL138831.2-201ENST00000606564 490 ntBASIC13.88□□□□□ -0.19
UBE2E2Q96LR5 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC13.88□□□□□ -0.19
UBE2E2Q96LR5 FLYWCH1P1-201ENST00000460917 1874 ntBASIC13.88□□□□□ -0.19
UBE2E2Q96LR5 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC13.88□□□□□ -0.19
UBE2E2Q96LR5 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBE2E2Q96LR5 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC13.88□□□□□ -0.19
UBE2E2Q96LR5 AC125634.1-201ENST00000438758 1403 ntBASIC13.88□□□□□ -0.19
UBE2E2Q96LR5 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
UBE2E2Q96LR5 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
UBE2E2Q96LR5 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC13.88□□□□□ -0.19
UBE2E2Q96LR5 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC13.88□□□□□ -0.19
UBE2E2Q96LR5 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBE2E2Q96LR5 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBE2E2Q96LR5 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBE2E2Q96LR5 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UBE2E2Q96LR5 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC13.88□□□□□ -0.19
UBE2E2Q96LR5 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC13.88□□□□□ -0.19
UBE2E2Q96LR5 AC097374.2-201ENST00000618617 1306 ntBASIC13.88□□□□□ -0.19
UBE2E2Q96LR5 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC13.88□□□□□ -0.19
UBE2E2Q96LR5 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
UBE2E2Q96LR5 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
UBE2E2Q96LR5 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC13.87□□□□□ -0.19
UBE2E2Q96LR5 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
UBE2E2Q96LR5 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
UBE2E2Q96LR5 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC13.87□□□□□ -0.19
UBE2E2Q96LR5 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
UBE2E2Q96LR5 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
UBE2E2Q96LR5 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
UBE2E2Q96LR5 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC13.87□□□□□ -0.19
UBE2E2Q96LR5 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
UBE2E2Q96LR5 EFTUD1P1-204ENST00000560401 1798 ntBASIC13.87□□□□□ -0.19
UBE2E2Q96LR5 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
UBE2E2Q96LR5 TBC1D3P5-201ENST00000579401 1545 ntBASIC13.87□□□□□ -0.19
UBE2E2Q96LR5 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
UBE2E2Q96LR5 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
UBE2E2Q96LR5 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
UBE2E2Q96LR5 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC13.87□□□□□ -0.19
UBE2E2Q96LR5 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC13.87□□□□□ -0.19
UBE2E2Q96LR5 TPM4P1-201ENST00000436100 807 ntBASIC13.87□□□□□ -0.19
UBE2E2Q96LR5 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
UBE2E2Q96LR5 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC13.87□□□□□ -0.19
UBE2E2Q96LR5 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC13.87□□□□□ -0.19
UBE2E2Q96LR5 TBCB-205ENST00000585746 875 ntTSL 3 BASIC13.87□□□□□ -0.19
UBE2E2Q96LR5 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
UBE2E2Q96LR5 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC13.87□□□□□ -0.19
UBE2E2Q96LR5 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC13.87□□□□□ -0.19
UBE2E2Q96LR5 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC13.87□□□□□ -0.19
UBE2E2Q96LR5 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
UBE2E2Q96LR5 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms