Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.99■□□□□ 0.63
TRIM11Q96F44 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
TRIM11Q96F44 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
TRIM11Q96F44 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
TRIM11Q96F44 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM11Q96F44 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.98■□□□□ 0.63
TRIM11Q96F44 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM11Q96F44 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM11Q96F44 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM11Q96F44 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.98■□□□□ 0.63
TRIM11Q96F44 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.98■□□□□ 0.63
TRIM11Q96F44 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM11Q96F44 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM11Q96F44 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.98■□□□□ 0.63
TRIM11Q96F44 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM11Q96F44 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.98■□□□□ 0.63
TRIM11Q96F44 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
TRIM11Q96F44 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
TRIM11Q96F44 AC011558.1-201ENST00000623459 338 ntBASIC18.98■□□□□ 0.63
TRIM11Q96F44 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM11Q96F44 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM11Q96F44 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM11Q96F44 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
TRIM11Q96F44 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
TRIM11Q96F44 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM11Q96F44 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.98■□□□□ 0.63
TRIM11Q96F44 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM11Q96F44 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.98■□□□□ 0.63
TRIM11Q96F44 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM11Q96F44 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM11Q96F44 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.97■□□□□ 0.63
TRIM11Q96F44 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
TRIM11Q96F44 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.97■□□□□ 0.63
TRIM11Q96F44 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM11Q96F44 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM11Q96F44 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.97■□□□□ 0.63
TRIM11Q96F44 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM11Q96F44 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
TRIM11Q96F44 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM11Q96F44 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM11Q96F44 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM11Q96F44 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM11Q96F44 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.97■□□□□ 0.63
TRIM11Q96F44 SPDYE15P-201ENST00000424157 909 ntBASIC18.97■□□□□ 0.63
TRIM11Q96F44 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.97■□□□□ 0.63
TRIM11Q96F44 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
TRIM11Q96F44 YBX1P2-201ENST00000489612 999 ntBASIC18.97■□□□□ 0.63
TRIM11Q96F44 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM11Q96F44 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM11Q96F44 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM11Q96F44 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.97■□□□□ 0.63
TRIM11Q96F44 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM11Q96F44 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM11Q96F44 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM11Q96F44 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
TRIM11Q96F44 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM11Q96F44 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM11Q96F44 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM11Q96F44 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
TRIM11Q96F44 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
TRIM11Q96F44 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
TRIM11Q96F44 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.97■□□□□ 0.63
TRIM11Q96F44 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM11Q96F44 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
TRIM11Q96F44 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM11Q96F44 AC020916.1-201ENST00000587762 1774 ntBASIC18.96■□□□□ 0.63
TRIM11Q96F44 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
TRIM11Q96F44 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
TRIM11Q96F44 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM11Q96F44 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM11Q96F44 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.96■□□□□ 0.63
TRIM11Q96F44 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
TRIM11Q96F44 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.96■□□□□ 0.63
TRIM11Q96F44 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
TRIM11Q96F44 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM11Q96F44 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM11Q96F44 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.96■□□□□ 0.63
TRIM11Q96F44 AC133963.1-201ENST00000504166 1679 ntBASIC18.96■□□□□ 0.63
TRIM11Q96F44 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM11Q96F44 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.96■□□□□ 0.63
TRIM11Q96F44 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.96■□□□□ 0.63
TRIM11Q96F44 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM11Q96F44 DDX43P3-201ENST00000441064 443 ntBASIC18.96■□□□□ 0.63
TRIM11Q96F44 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.96■□□□□ 0.63
TRIM11Q96F44 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.96■□□□□ 0.63
TRIM11Q96F44 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.96■□□□□ 0.63
TRIM11Q96F44 AC139887.4-201ENST00000607877 719 ntBASIC18.96■□□□□ 0.63
TRIM11Q96F44 AC009154.2-201ENST00000621177 724 ntBASIC18.96■□□□□ 0.63
TRIM11Q96F44 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM11Q96F44 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM11Q96F44 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM11Q96F44 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.96■□□□□ 0.63
TRIM11Q96F44 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.96■□□□□ 0.63
TRIM11Q96F44 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM11Q96F44 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
TRIM11Q96F44 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.96■□□□□ 0.63
TRIM11Q96F44 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM11Q96F44 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.96■□□□□ 0.63
TRIM11Q96F44 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.96■□□□□ 0.63
TRIM11Q96F44 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms