Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RTP4Q96DX8 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
RTP4Q96DX8 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.28■□□□□ 0.52
RTP4Q96DX8 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
RTP4Q96DX8 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTP4Q96DX8 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.28■□□□□ 0.52
RTP4Q96DX8 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTP4Q96DX8 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.28■□□□□ 0.52
RTP4Q96DX8 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTP4Q96DX8 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.28■□□□□ 0.52
RTP4Q96DX8 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
RTP4Q96DX8 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.28■□□□□ 0.52
RTP4Q96DX8 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RTP4Q96DX8 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTP4Q96DX8 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTP4Q96DX8 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.28■□□□□ 0.52
RTP4Q96DX8 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
RTP4Q96DX8 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.28■□□□□ 0.52
RTP4Q96DX8 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.28■□□□□ 0.52
RTP4Q96DX8 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.28■□□□□ 0.52
RTP4Q96DX8 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RTP4Q96DX8 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
RTP4Q96DX8 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RTP4Q96DX8 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.27■□□□□ 0.52
RTP4Q96DX8 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RTP4Q96DX8 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RTP4Q96DX8 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.27■□□□□ 0.52
RTP4Q96DX8 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RTP4Q96DX8 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RTP4Q96DX8 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RTP4Q96DX8 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
RTP4Q96DX8 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RTP4Q96DX8 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RTP4Q96DX8 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RTP4Q96DX8 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RTP4Q96DX8 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RTP4Q96DX8 MIR662-201ENST00000384847 95 ntBASIC18.27■□□□□ 0.52
RTP4Q96DX8 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RTP4Q96DX8 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RTP4Q96DX8 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.27■□□□□ 0.52
RTP4Q96DX8 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.27■□□□□ 0.52
RTP4Q96DX8 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.27■□□□□ 0.52
RTP4Q96DX8 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.27■□□□□ 0.52
RTP4Q96DX8 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.27■□□□□ 0.52
RTP4Q96DX8 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RTP4Q96DX8 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.27■□□□□ 0.52
RTP4Q96DX8 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.27■□□□□ 0.52
RTP4Q96DX8 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RTP4Q96DX8 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RTP4Q96DX8 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.27■□□□□ 0.52
RTP4Q96DX8 AL358472.4-201ENST00000633140 710 ntBASIC18.27■□□□□ 0.52
RTP4Q96DX8 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
RTP4Q96DX8 AIRN-201ENST00000601203 4374 ntBASIC18.27■□□□□ 0.52
RTP4Q96DX8 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.27■□□□□ 0.52
RTP4Q96DX8 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RTP4Q96DX8 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RTP4Q96DX8 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
RTP4Q96DX8 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RTP4Q96DX8 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
RTP4Q96DX8 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RTP4Q96DX8 AL023806.1-201ENST00000603994 1649 ntBASIC18.27■□□□□ 0.51
RTP4Q96DX8 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RTP4Q96DX8 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTP4Q96DX8 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
RTP4Q96DX8 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTP4Q96DX8 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
RTP4Q96DX8 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RTP4Q96DX8 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTP4Q96DX8 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.26■□□□□ 0.51
RTP4Q96DX8 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RTP4Q96DX8 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RTP4Q96DX8 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTP4Q96DX8 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTP4Q96DX8 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTP4Q96DX8 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTP4Q96DX8 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTP4Q96DX8 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTP4Q96DX8 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RTP4Q96DX8 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTP4Q96DX8 IGHGP-201ENST00000390555 1178 ntBASIC18.26■□□□□ 0.51
RTP4Q96DX8 AL031133.1-201ENST00000406807 723 ntBASIC18.26■□□□□ 0.51
RTP4Q96DX8 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.26■□□□□ 0.51
RTP4Q96DX8 AC092647.4-201ENST00000457211 535 ntBASIC18.26■□□□□ 0.51
RTP4Q96DX8 AC092597.1-201ENST00000487352 616 ntBASIC18.26■□□□□ 0.51
RTP4Q96DX8 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC18.26■□□□□ 0.51
RTP4Q96DX8 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RTP4Q96DX8 AC091076.1-201ENST00000610741 619 ntBASIC18.26■□□□□ 0.51
RTP4Q96DX8 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTP4Q96DX8 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTP4Q96DX8 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTP4Q96DX8 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RTP4Q96DX8 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.26■□□□□ 0.51
RTP4Q96DX8 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.25■□□□□ 0.51
RTP4Q96DX8 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.25■□□□□ 0.51
RTP4Q96DX8 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.25■□□□□ 0.51
RTP4Q96DX8 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RTP4Q96DX8 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.25■□□□□ 0.51
RTP4Q96DX8 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RTP4Q96DX8 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RTP4Q96DX8 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms