Protein–RNA interactions for Protein: Q96BH1

RNF25, E3 ubiquitin-protein ligase RNF25, humanhuman

Predicted RBP Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF25Q96BH1 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.89■□□□□ 0.61
RNF25Q96BH1 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF25Q96BH1 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.89■□□□□ 0.61
RNF25Q96BH1 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.89■□□□□ 0.61
RNF25Q96BH1 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF25Q96BH1 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.89■□□□□ 0.61
RNF25Q96BH1 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.89■□□□□ 0.61
RNF25Q96BH1 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
RNF25Q96BH1 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
RNF25Q96BH1 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF25Q96BH1 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RNF25Q96BH1 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RNF25Q96BH1 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.89■□□□□ 0.61
RNF25Q96BH1 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.89■□□□□ 0.61
RNF25Q96BH1 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.89■□□□□ 0.61
RNF25Q96BH1 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RNF25Q96BH1 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.89■□□□□ 0.61
RNF25Q96BH1 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.89■□□□□ 0.61
RNF25Q96BH1 AL512604.3-201ENST00000569583 964 ntBASIC18.89■□□□□ 0.61
RNF25Q96BH1 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.89■□□□□ 0.61
RNF25Q96BH1 AL133445.2-201ENST00000611191 527 ntBASIC18.89■□□□□ 0.61
RNF25Q96BH1 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF25Q96BH1 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.89■□□□□ 0.61
RNF25Q96BH1 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF25Q96BH1 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF25Q96BH1 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RNF25Q96BH1 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF25Q96BH1 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
RNF25Q96BH1 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.89■□□□□ 0.61
RNF25Q96BH1 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.89■□□□□ 0.61
RNF25Q96BH1 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.89■□□□□ 0.61
RNF25Q96BH1 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF25Q96BH1 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RNF25Q96BH1 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RNF25Q96BH1 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RNF25Q96BH1 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF25Q96BH1 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RNF25Q96BH1 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.88■□□□□ 0.61
RNF25Q96BH1 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF25Q96BH1 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF25Q96BH1 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.88■□□□□ 0.61
RNF25Q96BH1 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF25Q96BH1 AC106820.2-201ENST00000563775 3264 ntBASIC18.88■□□□□ 0.61
RNF25Q96BH1 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RNF25Q96BH1 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RNF25Q96BH1 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.88■□□□□ 0.61
RNF25Q96BH1 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF25Q96BH1 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF25Q96BH1 MIR3917-201ENST00000580971 93 ntBASIC18.88■□□□□ 0.61
RNF25Q96BH1 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.88■□□□□ 0.61
RNF25Q96BH1 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.88■□□□□ 0.61
RNF25Q96BH1 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
RNF25Q96BH1 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF25Q96BH1 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
RNF25Q96BH1 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
RNF25Q96BH1 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RNF25Q96BH1 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RNF25Q96BH1 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
RNF25Q96BH1 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF25Q96BH1 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RNF25Q96BH1 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.87■□□□□ 0.61
RNF25Q96BH1 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.87■□□□□ 0.61
RNF25Q96BH1 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF25Q96BH1 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
RNF25Q96BH1 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.87■□□□□ 0.61
RNF25Q96BH1 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
RNF25Q96BH1 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
RNF25Q96BH1 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF25Q96BH1 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF25Q96BH1 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF25Q96BH1 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.87■□□□□ 0.61
RNF25Q96BH1 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF25Q96BH1 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF25Q96BH1 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF25Q96BH1 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
RNF25Q96BH1 KRT18P22-201ENST00000402024 1347 ntBASIC18.87■□□□□ 0.61
RNF25Q96BH1 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.87■□□□□ 0.61
RNF25Q96BH1 ECEL1P3-201ENST00000427961 737 ntBASIC18.87■□□□□ 0.61
RNF25Q96BH1 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.87■□□□□ 0.61
RNF25Q96BH1 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.87■□□□□ 0.61
RNF25Q96BH1 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.87■□□□□ 0.61
RNF25Q96BH1 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RNF25Q96BH1 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.87■□□□□ 0.61
RNF25Q96BH1 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF25Q96BH1 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.87■□□□□ 0.61
RNF25Q96BH1 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.87■□□□□ 0.61
RNF25Q96BH1 NEK4P2-201ENST00000580004 1012 ntBASIC18.87■□□□□ 0.61
RNF25Q96BH1 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.87■□□□□ 0.61
RNF25Q96BH1 AP001442.1-203ENST00000596385 876 ntTSL 5 BASIC18.87■□□□□ 0.61
RNF25Q96BH1 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RNF25Q96BH1 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.87■□□□□ 0.61
RNF25Q96BH1 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
RNF25Q96BH1 AC132938.6-201ENST00000623828 1655 ntBASIC18.87■□□□□ 0.61
RNF25Q96BH1 AL157888.1-201ENST00000631930 593 ntBASIC18.87■□□□□ 0.61
RNF25Q96BH1 OR6D1P-202ENST00000641007 5290 ntBASIC18.87■□□□□ 0.61
RNF25Q96BH1 AC092865.7-201ENST00000641832 219 ntBASIC18.87■□□□□ 0.61
RNF25Q96BH1 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF25Q96BH1 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RNF25Q96BH1 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF25Q96BH1 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms