Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC19.28■□□□□ 0.68
SEMA4DQ92854 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SEMA4DQ92854 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SEMA4DQ92854 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SEMA4DQ92854 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SEMA4DQ92854 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SEMA4DQ92854 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.28■□□□□ 0.68
SEMA4DQ92854 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SEMA4DQ92854 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SEMA4DQ92854 RMI2-205ENST00000576027 818 ntTSL 2 BASIC19.28■□□□□ 0.68
SEMA4DQ92854 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SEMA4DQ92854 AL592071.1-201ENST00000611956 408 ntBASIC19.28■□□□□ 0.68
SEMA4DQ92854 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SEMA4DQ92854 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC19.28■□□□□ 0.68
SEMA4DQ92854 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.28■□□□□ 0.68
SEMA4DQ92854 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SEMA4DQ92854 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
SEMA4DQ92854 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SEMA4DQ92854 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SEMA4DQ92854 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC19.28■□□□□ 0.68
SEMA4DQ92854 IER3-202ENST00000376377 1350 ntBASIC19.28■□□□□ 0.68
SEMA4DQ92854 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SEMA4DQ92854 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.28■□□□□ 0.68
SEMA4DQ92854 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SEMA4DQ92854 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SEMA4DQ92854 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SEMA4DQ92854 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SEMA4DQ92854 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SEMA4DQ92854 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SEMA4DQ92854 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
SEMA4DQ92854 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SEMA4DQ92854 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SEMA4DQ92854 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
SEMA4DQ92854 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SEMA4DQ92854 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
SEMA4DQ92854 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.27■□□□□ 0.68
SEMA4DQ92854 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
SEMA4DQ92854 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC19.27■□□□□ 0.68
SEMA4DQ92854 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
SEMA4DQ92854 AC124864.1-201ENST00000623408 392 ntBASIC19.27■□□□□ 0.68
SEMA4DQ92854 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SEMA4DQ92854 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
SEMA4DQ92854 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SEMA4DQ92854 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SEMA4DQ92854 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC19.26■□□□□ 0.67
SEMA4DQ92854 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC19.26■□□□□ 0.67
SEMA4DQ92854 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SEMA4DQ92854 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SEMA4DQ92854 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SEMA4DQ92854 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SEMA4DQ92854 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SEMA4DQ92854 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SEMA4DQ92854 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SEMA4DQ92854 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SEMA4DQ92854 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SEMA4DQ92854 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
SEMA4DQ92854 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
SEMA4DQ92854 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SEMA4DQ92854 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.26■□□□□ 0.67
SEMA4DQ92854 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SEMA4DQ92854 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19.26■□□□□ 0.67
SEMA4DQ92854 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SEMA4DQ92854 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC19.26■□□□□ 0.67
SEMA4DQ92854 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SEMA4DQ92854 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.26■□□□□ 0.67
SEMA4DQ92854 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC19.26■□□□□ 0.67
SEMA4DQ92854 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.26■□□□□ 0.67
SEMA4DQ92854 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SEMA4DQ92854 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
SEMA4DQ92854 LINC00896-202ENST00000609602 2128 ntBASIC19.26■□□□□ 0.67
SEMA4DQ92854 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SEMA4DQ92854 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.26■□□□□ 0.67
SEMA4DQ92854 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC19.26■□□□□ 0.67
SEMA4DQ92854 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
SEMA4DQ92854 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SEMA4DQ92854 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SEMA4DQ92854 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SEMA4DQ92854 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
SEMA4DQ92854 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
SEMA4DQ92854 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SEMA4DQ92854 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
SEMA4DQ92854 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SEMA4DQ92854 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC19.25■□□□□ 0.67
SEMA4DQ92854 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC19.25■□□□□ 0.67
SEMA4DQ92854 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SEMA4DQ92854 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC19.25■□□□□ 0.67
SEMA4DQ92854 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SEMA4DQ92854 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC19.25■□□□□ 0.67
SEMA4DQ92854 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC19.25■□□□□ 0.67
SEMA4DQ92854 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SEMA4DQ92854 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
SEMA4DQ92854 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.25■□□□□ 0.67
SEMA4DQ92854 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SEMA4DQ92854 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SEMA4DQ92854 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
SEMA4DQ92854 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SEMA4DQ92854 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SEMA4DQ92854 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SEMA4DQ92854 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SEMA4DQ92854 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms