Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
AP3S1Q92572 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
AP3S1Q92572 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
AP3S1Q92572 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
AP3S1Q92572 AGGF1P2-201ENST00000426656 2106 ntBASIC15.83■□□□□ 0.12
AP3S1Q92572 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
AP3S1Q92572 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
AP3S1Q92572 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.83■□□□□ 0.12
AP3S1Q92572 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.83■□□□□ 0.12
AP3S1Q92572 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
AP3S1Q92572 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
AP3S1Q92572 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
AP3S1Q92572 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP3S1Q92572 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
AP3S1Q92572 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC15.82■□□□□ 0.12
AP3S1Q92572 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP3S1Q92572 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.82■□□□□ 0.12
AP3S1Q92572 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP3S1Q92572 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP3S1Q92572 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP3S1Q92572 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
AP3S1Q92572 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP3S1Q92572 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
AP3S1Q92572 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
AP3S1Q92572 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP3S1Q92572 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
AP3S1Q92572 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP3S1Q92572 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP3S1Q92572 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC15.82■□□□□ 0.12
AP3S1Q92572 METTL26-203ENST00000397664 604 ntTSL 2 BASIC15.82■□□□□ 0.12
AP3S1Q92572 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
AP3S1Q92572 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC15.82■□□□□ 0.12
AP3S1Q92572 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
AP3S1Q92572 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP3S1Q92572 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC15.82■□□□□ 0.12
AP3S1Q92572 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC15.82■□□□□ 0.12
AP3S1Q92572 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC15.82■□□□□ 0.12
AP3S1Q92572 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC15.82■□□□□ 0.12
AP3S1Q92572 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC15.82■□□□□ 0.12
AP3S1Q92572 MAZ-216ENST00000616501 991 ntTSL 5 BASIC15.82■□□□□ 0.12
AP3S1Q92572 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP3S1Q92572 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
AP3S1Q92572 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP3S1Q92572 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC15.82■□□□□ 0.12
AP3S1Q92572 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
AP3S1Q92572 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
AP3S1Q92572 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC15.82■□□□□ 0.12
AP3S1Q92572 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
AP3S1Q92572 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.82■□□□□ 0.12
AP3S1Q92572 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
AP3S1Q92572 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC15.82■□□□□ 0.12
AP3S1Q92572 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP3S1Q92572 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP3S1Q92572 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP3S1Q92572 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP3S1Q92572 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.82■□□□□ 0.12
AP3S1Q92572 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
AP3S1Q92572 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
AP3S1Q92572 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.81■□□□□ 0.12
AP3S1Q92572 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP3S1Q92572 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.81■□□□□ 0.12
AP3S1Q92572 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP3S1Q92572 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP3S1Q92572 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP3S1Q92572 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC15.81■□□□□ 0.12
AP3S1Q92572 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP3S1Q92572 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP3S1Q92572 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
AP3S1Q92572 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP3S1Q92572 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP3S1Q92572 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC15.81■□□□□ 0.12
AP3S1Q92572 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP3S1Q92572 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
AP3S1Q92572 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
AP3S1Q92572 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP3S1Q92572 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP3S1Q92572 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.81■□□□□ 0.12
AP3S1Q92572 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
AP3S1Q92572 AC004264.1-201ENST00000608354 794 ntBASIC15.81■□□□□ 0.12
AP3S1Q92572 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
AP3S1Q92572 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.81■□□□□ 0.12
AP3S1Q92572 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC15.81■□□□□ 0.12
AP3S1Q92572 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP3S1Q92572 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP3S1Q92572 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
AP3S1Q92572 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
AP3S1Q92572 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
AP3S1Q92572 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
AP3S1Q92572 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
AP3S1Q92572 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
AP3S1Q92572 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.8■□□□□ 0.12
AP3S1Q92572 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
AP3S1Q92572 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC15.8■□□□□ 0.12
AP3S1Q92572 HLA-J-201ENST00000462773 1622 ntBASIC15.8■□□□□ 0.12
AP3S1Q92572 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
AP3S1Q92572 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
AP3S1Q92572 HACD1-201ENST00000326961 773 ntTSL 2 BASIC15.8■□□□□ 0.12
AP3S1Q92572 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC15.8■□□□□ 0.12
AP3S1Q92572 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
AP3S1Q92572 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms