Protein–RNA interactions for Protein: Q8WXE1

ATRIP, ATR-interacting protein, humanhuman

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIPQ8WXE1 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATRIPQ8WXE1 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC19.78■□□□□ 0.76
ATRIPQ8WXE1 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ATRIPQ8WXE1 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATRIPQ8WXE1 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.78■□□□□ 0.76
ATRIPQ8WXE1 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATRIPQ8WXE1 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATRIPQ8WXE1 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
ATRIPQ8WXE1 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
ATRIPQ8WXE1 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
ATRIPQ8WXE1 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
ATRIPQ8WXE1 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
ATRIPQ8WXE1 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.78■□□□□ 0.76
ATRIPQ8WXE1 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.78■□□□□ 0.76
ATRIPQ8WXE1 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.78■□□□□ 0.76
ATRIPQ8WXE1 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
ATRIPQ8WXE1 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.78■□□□□ 0.76
ATRIPQ8WXE1 AC008622.2-201ENST00000617006 1229 ntBASIC19.78■□□□□ 0.76
ATRIPQ8WXE1 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.78■□□□□ 0.76
ATRIPQ8WXE1 AL031432.5-201ENST00000641059 760 ntBASIC19.78■□□□□ 0.76
ATRIPQ8WXE1 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATRIPQ8WXE1 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATRIPQ8WXE1 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATRIPQ8WXE1 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATRIPQ8WXE1 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.78■□□□□ 0.76
ATRIPQ8WXE1 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.78■□□□□ 0.76
ATRIPQ8WXE1 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
ATRIPQ8WXE1 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ATRIPQ8WXE1 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC19.78■□□□□ 0.76
ATRIPQ8WXE1 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
ATRIPQ8WXE1 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATRIPQ8WXE1 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.77■□□□□ 0.76
ATRIPQ8WXE1 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC19.77■□□□□ 0.76
ATRIPQ8WXE1 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
ATRIPQ8WXE1 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ATRIPQ8WXE1 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
ATRIPQ8WXE1 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ATRIPQ8WXE1 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ATRIPQ8WXE1 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ATRIPQ8WXE1 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ATRIPQ8WXE1 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ATRIPQ8WXE1 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ATRIPQ8WXE1 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ATRIPQ8WXE1 PRSS44-201ENST00000515154 1146 ntBASIC19.77■□□□□ 0.76
ATRIPQ8WXE1 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ATRIPQ8WXE1 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
ATRIPQ8WXE1 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC19.77■□□□□ 0.76
ATRIPQ8WXE1 PKD1P1-201ENST00000458669 6805 ntBASIC19.77■□□□□ 0.76
ATRIPQ8WXE1 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ATRIPQ8WXE1 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
ATRIPQ8WXE1 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
ATRIPQ8WXE1 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
ATRIPQ8WXE1 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
ATRIPQ8WXE1 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
ATRIPQ8WXE1 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
ATRIPQ8WXE1 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATRIPQ8WXE1 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.76■□□□□ 0.75
ATRIPQ8WXE1 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATRIPQ8WXE1 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATRIPQ8WXE1 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
ATRIPQ8WXE1 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATRIPQ8WXE1 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATRIPQ8WXE1 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATRIPQ8WXE1 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.76■□□□□ 0.75
ATRIPQ8WXE1 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ATRIPQ8WXE1 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATRIPQ8WXE1 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
ATRIPQ8WXE1 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
ATRIPQ8WXE1 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.76■□□□□ 0.75
ATRIPQ8WXE1 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC19.76■□□□□ 0.75
ATRIPQ8WXE1 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC19.76■□□□□ 0.75
ATRIPQ8WXE1 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.76■□□□□ 0.75
ATRIPQ8WXE1 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC19.76■□□□□ 0.75
ATRIPQ8WXE1 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATRIPQ8WXE1 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
ATRIPQ8WXE1 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ATRIPQ8WXE1 FLJ13224-201ENST00000313737 1514 ntBASIC19.76■□□□□ 0.75
ATRIPQ8WXE1 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
ATRIPQ8WXE1 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
ATRIPQ8WXE1 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC19.75■□□□□ 0.75
ATRIPQ8WXE1 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.75■□□□□ 0.75
ATRIPQ8WXE1 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.75■□□□□ 0.75
ATRIPQ8WXE1 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
ATRIPQ8WXE1 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATRIPQ8WXE1 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATRIPQ8WXE1 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATRIPQ8WXE1 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.75■□□□□ 0.75
ATRIPQ8WXE1 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATRIPQ8WXE1 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATRIPQ8WXE1 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATRIPQ8WXE1 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATRIPQ8WXE1 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC19.75■□□□□ 0.75
ATRIPQ8WXE1 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
ATRIPQ8WXE1 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATRIPQ8WXE1 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATRIPQ8WXE1 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATRIPQ8WXE1 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.75■□□□□ 0.75
ATRIPQ8WXE1 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATRIPQ8WXE1 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.75■□□□□ 0.75
ATRIPQ8WXE1 HOMER2P1-201ENST00000455653 964 ntBASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms