Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.08■□□□□ 0.48
CHD5Q8TDI0 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
CHD5Q8TDI0 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
CHD5Q8TDI0 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
CHD5Q8TDI0 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.08■□□□□ 0.48
CHD5Q8TDI0 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHD5Q8TDI0 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CHD5Q8TDI0 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CHD5Q8TDI0 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHD5Q8TDI0 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.08■□□□□ 0.48
CHD5Q8TDI0 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.08■□□□□ 0.48
CHD5Q8TDI0 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.08■□□□□ 0.48
CHD5Q8TDI0 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHD5Q8TDI0 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
CHD5Q8TDI0 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHD5Q8TDI0 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CHD5Q8TDI0 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CHD5Q8TDI0 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHD5Q8TDI0 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
CHD5Q8TDI0 SIGLEC16-201ENST00000599858 1437 ntBASIC18.07■□□□□ 0.48
CHD5Q8TDI0 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.07■□□□□ 0.48
CHD5Q8TDI0 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHD5Q8TDI0 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHD5Q8TDI0 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.07■□□□□ 0.48
CHD5Q8TDI0 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.07■□□□□ 0.48
CHD5Q8TDI0 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CHD5Q8TDI0 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CHD5Q8TDI0 SAPCD2P3-201ENST00000455031 850 ntBASIC18.07■□□□□ 0.48
CHD5Q8TDI0 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHD5Q8TDI0 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.07■□□□□ 0.48
CHD5Q8TDI0 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.07■□□□□ 0.48
CHD5Q8TDI0 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.07■□□□□ 0.48
CHD5Q8TDI0 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.07■□□□□ 0.48
CHD5Q8TDI0 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.07■□□□□ 0.48
CHD5Q8TDI0 AC019129.2-201ENST00000609837 1235 ntBASIC18.07■□□□□ 0.48
CHD5Q8TDI0 AC114341.1-201ENST00000618070 349 ntBASIC18.07■□□□□ 0.48
CHD5Q8TDI0 TP73-AS1-207ENST00000624167 988 ntBASIC18.07■□□□□ 0.48
CHD5Q8TDI0 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.07■□□□□ 0.48
CHD5Q8TDI0 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHD5Q8TDI0 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
CHD5Q8TDI0 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHD5Q8TDI0 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
CHD5Q8TDI0 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CHD5Q8TDI0 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHD5Q8TDI0 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHD5Q8TDI0 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.06■□□□□ 0.48
CHD5Q8TDI0 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.06■□□□□ 0.48
CHD5Q8TDI0 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHD5Q8TDI0 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CHD5Q8TDI0 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC18.06■□□□□ 0.48
CHD5Q8TDI0 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.06■□□□□ 0.48
CHD5Q8TDI0 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC18.06■□□□□ 0.48
CHD5Q8TDI0 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.06■□□□□ 0.48
CHD5Q8TDI0 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHD5Q8TDI0 AC148477.5-201ENST00000625164 1645 ntBASIC18.06■□□□□ 0.48
CHD5Q8TDI0 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.06■□□□□ 0.48
CHD5Q8TDI0 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHD5Q8TDI0 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.06■□□□□ 0.48
CHD5Q8TDI0 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CHD5Q8TDI0 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHD5Q8TDI0 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHD5Q8TDI0 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.06■□□□□ 0.48
CHD5Q8TDI0 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHD5Q8TDI0 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CHD5Q8TDI0 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHD5Q8TDI0 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
CHD5Q8TDI0 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.06■□□□□ 0.48
CHD5Q8TDI0 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHD5Q8TDI0 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHD5Q8TDI0 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CHD5Q8TDI0 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CHD5Q8TDI0 AF238378.1-201ENST00000526806 358 ntBASIC18.06■□□□□ 0.48
CHD5Q8TDI0 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.06■□□□□ 0.48
CHD5Q8TDI0 AD001527.2-201ENST00000622994 785 ntBASIC18.06■□□□□ 0.48
CHD5Q8TDI0 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CHD5Q8TDI0 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHD5Q8TDI0 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHD5Q8TDI0 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.05■□□□□ 0.48
CHD5Q8TDI0 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.05■□□□□ 0.48
CHD5Q8TDI0 AC079776.2-201ENST00000641154 1609 ntBASIC18.05■□□□□ 0.48
CHD5Q8TDI0 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHD5Q8TDI0 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHD5Q8TDI0 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.05■□□□□ 0.48
CHD5Q8TDI0 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHD5Q8TDI0 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
CHD5Q8TDI0 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHD5Q8TDI0 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHD5Q8TDI0 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHD5Q8TDI0 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHD5Q8TDI0 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.05■□□□□ 0.48
CHD5Q8TDI0 AC116407.2-201ENST00000613639 860 ntBASIC18.05■□□□□ 0.48
CHD5Q8TDI0 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.05■□□□□ 0.48
CHD5Q8TDI0 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHD5Q8TDI0 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CHD5Q8TDI0 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHD5Q8TDI0 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHD5Q8TDI0 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CHD5Q8TDI0 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
CHD5Q8TDI0 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.05■□□□□ 0.48
CHD5Q8TDI0 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms