Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC20.85■□□□□ 0.93
NEDD1Q8NHV4 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NEDD1Q8NHV4 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC20.85■□□□□ 0.93
NEDD1Q8NHV4 WDR88-203ENST00000592765 651 ntTSL 5 BASIC20.85■□□□□ 0.93
NEDD1Q8NHV4 AC116407.2-201ENST00000613639 860 ntBASIC20.85■□□□□ 0.93
NEDD1Q8NHV4 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC20.85■□□□□ 0.93
NEDD1Q8NHV4 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
NEDD1Q8NHV4 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NEDD1Q8NHV4 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NEDD1Q8NHV4 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
NEDD1Q8NHV4 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC20.85■□□□□ 0.93
NEDD1Q8NHV4 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
NEDD1Q8NHV4 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC20.85■□□□□ 0.93
NEDD1Q8NHV4 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC20.85■□□□□ 0.93
NEDD1Q8NHV4 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC20.85■□□□□ 0.93
NEDD1Q8NHV4 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
NEDD1Q8NHV4 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NEDD1Q8NHV4 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC20.84■□□□□ 0.93
NEDD1Q8NHV4 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NEDD1Q8NHV4 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
NEDD1Q8NHV4 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC20.84■□□□□ 0.93
NEDD1Q8NHV4 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC20.84■□□□□ 0.93
NEDD1Q8NHV4 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC20.84■□□□□ 0.93
NEDD1Q8NHV4 FAM197Y8-203ENST00000450145 560 ntBASIC20.84■□□□□ 0.93
NEDD1Q8NHV4 PPIE-208ENST00000470213 927 ntTSL 3 BASIC20.84■□□□□ 0.93
NEDD1Q8NHV4 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
NEDD1Q8NHV4 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
NEDD1Q8NHV4 AD001527.2-201ENST00000622994 785 ntBASIC20.84■□□□□ 0.93
NEDD1Q8NHV4 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NEDD1Q8NHV4 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC20.84■□□□□ 0.93
NEDD1Q8NHV4 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NEDD1Q8NHV4 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
NEDD1Q8NHV4 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC20.84■□□□□ 0.93
NEDD1Q8NHV4 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC20.84■□□□□ 0.93
NEDD1Q8NHV4 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NEDD1Q8NHV4 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NEDD1Q8NHV4 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.84■□□□□ 0.93
NEDD1Q8NHV4 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC20.84■□□□□ 0.93
NEDD1Q8NHV4 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NEDD1Q8NHV4 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
NEDD1Q8NHV4 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NEDD1Q8NHV4 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
NEDD1Q8NHV4 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC20.84■□□□□ 0.93
NEDD1Q8NHV4 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC20.83■□□□□ 0.93
NEDD1Q8NHV4 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC20.83■□□□□ 0.93
NEDD1Q8NHV4 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
NEDD1Q8NHV4 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
NEDD1Q8NHV4 AC138028.4-201ENST00000564984 1845 ntBASIC20.83■□□□□ 0.93
NEDD1Q8NHV4 AC009949.1-201ENST00000623048 1830 ntBASIC20.83■□□□□ 0.93
NEDD1Q8NHV4 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
NEDD1Q8NHV4 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
NEDD1Q8NHV4 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NEDD1Q8NHV4 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
NEDD1Q8NHV4 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NEDD1Q8NHV4 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC20.83■□□□□ 0.93
NEDD1Q8NHV4 DDX43P3-201ENST00000441064 443 ntBASIC20.83■□□□□ 0.93
NEDD1Q8NHV4 SRP19-202ENST00000445150 833 ntTSL 2 BASIC20.83■□□□□ 0.93
NEDD1Q8NHV4 AL662844.1-201ENST00000546340 181 ntBASIC20.83■□□□□ 0.93
NEDD1Q8NHV4 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
NEDD1Q8NHV4 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC20.83■□□□□ 0.93
NEDD1Q8NHV4 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC20.83■□□□□ 0.93
NEDD1Q8NHV4 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
NEDD1Q8NHV4 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC20.83■□□□□ 0.93
NEDD1Q8NHV4 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
NEDD1Q8NHV4 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.92
NEDD1Q8NHV4 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC20.83■□□□□ 0.92
NEDD1Q8NHV4 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC20.83■□□□□ 0.92
NEDD1Q8NHV4 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.83■□□□□ 0.92
NEDD1Q8NHV4 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
NEDD1Q8NHV4 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
NEDD1Q8NHV4 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
NEDD1Q8NHV4 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.82■□□□□ 0.92
NEDD1Q8NHV4 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NEDD1Q8NHV4 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NEDD1Q8NHV4 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NEDD1Q8NHV4 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
NEDD1Q8NHV4 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
NEDD1Q8NHV4 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC20.82■□□□□ 0.92
NEDD1Q8NHV4 AC103564.2-201ENST00000432853 1299 ntBASIC20.82■□□□□ 0.92
NEDD1Q8NHV4 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC20.82■□□□□ 0.92
NEDD1Q8NHV4 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NEDD1Q8NHV4 MNT-208ENST00000575394 606 ntTSL 4 BASIC20.82■□□□□ 0.92
NEDD1Q8NHV4 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC20.82■□□□□ 0.92
NEDD1Q8NHV4 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NEDD1Q8NHV4 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
NEDD1Q8NHV4 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NEDD1Q8NHV4 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
NEDD1Q8NHV4 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
NEDD1Q8NHV4 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NEDD1Q8NHV4 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NEDD1Q8NHV4 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC20.82■□□□□ 0.92
NEDD1Q8NHV4 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC20.82■□□□□ 0.92
NEDD1Q8NHV4 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NEDD1Q8NHV4 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC20.82■□□□□ 0.92
NEDD1Q8NHV4 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NEDD1Q8NHV4 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NEDD1Q8NHV4 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC20.82■□□□□ 0.92
NEDD1Q8NHV4 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC20.82■□□□□ 0.92
NEDD1Q8NHV4 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NEDD1Q8NHV4 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms