Protein–RNA interactions for Protein: Q8NFD5

ARID1B, AT-rich interactive domain-containing protein 1B, humanhuman

Predicted RBP Predictions only

Length 2,236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID1BQ8NFD5 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
ARID1BQ8NFD5 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ARID1BQ8NFD5 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.42■□□□□ 0.38
ARID1BQ8NFD5 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.42■□□□□ 0.38
ARID1BQ8NFD5 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.42■□□□□ 0.38
ARID1BQ8NFD5 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
ARID1BQ8NFD5 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ARID1BQ8NFD5 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ARID1BQ8NFD5 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.42■□□□□ 0.38
ARID1BQ8NFD5 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
ARID1BQ8NFD5 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
ARID1BQ8NFD5 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ARID1BQ8NFD5 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.41■□□□□ 0.38
ARID1BQ8NFD5 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.41■□□□□ 0.38
ARID1BQ8NFD5 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
ARID1BQ8NFD5 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ARID1BQ8NFD5 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
ARID1BQ8NFD5 AC025062.2-201ENST00000605477 670 ntBASIC17.41■□□□□ 0.38
ARID1BQ8NFD5 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
ARID1BQ8NFD5 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC17.41■□□□□ 0.38
ARID1BQ8NFD5 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.41■□□□□ 0.38
ARID1BQ8NFD5 AC010460.3-201ENST00000511359 1579 ntBASIC17.41■□□□□ 0.38
ARID1BQ8NFD5 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.41■□□□□ 0.38
ARID1BQ8NFD5 AC079776.2-201ENST00000641154 1609 ntBASIC17.41■□□□□ 0.38
ARID1BQ8NFD5 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
ARID1BQ8NFD5 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ARID1BQ8NFD5 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ARID1BQ8NFD5 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
ARID1BQ8NFD5 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
ARID1BQ8NFD5 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ARID1BQ8NFD5 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ARID1BQ8NFD5 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
ARID1BQ8NFD5 RPSAP43-201ENST00000402237 625 ntBASIC17.41■□□□□ 0.38
ARID1BQ8NFD5 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.41■□□□□ 0.38
ARID1BQ8NFD5 MTDHP4-201ENST00000600287 670 ntBASIC17.41■□□□□ 0.38
ARID1BQ8NFD5 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.41■□□□□ 0.38
ARID1BQ8NFD5 KRT8P47-201ENST00000604727 1398 ntBASIC17.41■□□□□ 0.38
ARID1BQ8NFD5 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
ARID1BQ8NFD5 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ARID1BQ8NFD5 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.4■□□□□ 0.38
ARID1BQ8NFD5 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
ARID1BQ8NFD5 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ARID1BQ8NFD5 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.4■□□□□ 0.38
ARID1BQ8NFD5 FAM220CP-201ENST00000395253 831 ntBASIC17.4■□□□□ 0.38
ARID1BQ8NFD5 MIR940-201ENST00000401276 94 ntBASIC17.4■□□□□ 0.38
ARID1BQ8NFD5 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.4■□□□□ 0.38
ARID1BQ8NFD5 AL591424.1-201ENST00000442569 1213 ntBASIC17.4■□□□□ 0.38
ARID1BQ8NFD5 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
ARID1BQ8NFD5 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.4■□□□□ 0.38
ARID1BQ8NFD5 FAM197Y3-203ENST00000618346 717 ntBASIC17.4■□□□□ 0.38
ARID1BQ8NFD5 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ARID1BQ8NFD5 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.4■□□□□ 0.38
ARID1BQ8NFD5 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
ARID1BQ8NFD5 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
ARID1BQ8NFD5 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ARID1BQ8NFD5 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ARID1BQ8NFD5 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.4■□□□□ 0.38
ARID1BQ8NFD5 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
ARID1BQ8NFD5 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.4■□□□□ 0.38
ARID1BQ8NFD5 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ARID1BQ8NFD5 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ARID1BQ8NFD5 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ARID1BQ8NFD5 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.4■□□□□ 0.38
ARID1BQ8NFD5 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.4■□□□□ 0.38
ARID1BQ8NFD5 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ARID1BQ8NFD5 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ARID1BQ8NFD5 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
ARID1BQ8NFD5 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.4■□□□□ 0.38
ARID1BQ8NFD5 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.4■□□□□ 0.38
ARID1BQ8NFD5 AC004817.3-201ENST00000602957 2129 ntBASIC17.4■□□□□ 0.38
ARID1BQ8NFD5 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.4■□□□□ 0.38
ARID1BQ8NFD5 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ARID1BQ8NFD5 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ARID1BQ8NFD5 SIGLEC16-201ENST00000599858 1437 ntBASIC17.4■□□□□ 0.38
ARID1BQ8NFD5 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.4■□□□□ 0.38
ARID1BQ8NFD5 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
ARID1BQ8NFD5 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
ARID1BQ8NFD5 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ARID1BQ8NFD5 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
ARID1BQ8NFD5 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
ARID1BQ8NFD5 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ARID1BQ8NFD5 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ARID1BQ8NFD5 UPF3AP3-201ENST00000420996 769 ntBASIC17.39■□□□□ 0.37
ARID1BQ8NFD5 KRT18P3-201ENST00000451602 1288 ntBASIC17.39■□□□□ 0.37
ARID1BQ8NFD5 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
ARID1BQ8NFD5 AC092183.1-201ENST00000469884 875 ntBASIC17.39■□□□□ 0.37
ARID1BQ8NFD5 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.39■□□□□ 0.37
ARID1BQ8NFD5 Z83851.2-201ENST00000609564 659 ntBASIC17.39■□□□□ 0.37
ARID1BQ8NFD5 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.39■□□□□ 0.37
ARID1BQ8NFD5 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
ARID1BQ8NFD5 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ARID1BQ8NFD5 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
ARID1BQ8NFD5 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ARID1BQ8NFD5 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ARID1BQ8NFD5 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ARID1BQ8NFD5 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.39■□□□□ 0.37
ARID1BQ8NFD5 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.39■□□□□ 0.37
ARID1BQ8NFD5 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ARID1BQ8NFD5 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.39■□□□□ 0.37
ARID1BQ8NFD5 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms