Protein–RNA interactions for Protein: Q8NA58

PNLDC1, Poly(A)-specific ribonuclease PNLDC1, humanhuman

Known RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNLDC1Q8NA58 AC010653.2-201ENST00000623505 997 ntBASIC15.71■□□□□ 0.11
PNLDC1Q8NA58 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PNLDC1Q8NA58 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
PNLDC1Q8NA58 CYP51A1P1-201ENST00000492267 1507 ntBASIC15.71■□□□□ 0.11
PNLDC1Q8NA58 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PNLDC1Q8NA58 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC15.71■□□□□ 0.11
PNLDC1Q8NA58 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PNLDC1Q8NA58 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PNLDC1Q8NA58 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PNLDC1Q8NA58 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
PNLDC1Q8NA58 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
PNLDC1Q8NA58 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PNLDC1Q8NA58 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PNLDC1Q8NA58 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.1
PNLDC1Q8NA58 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
PNLDC1Q8NA58 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PNLDC1Q8NA58 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.1
PNLDC1Q8NA58 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
PNLDC1Q8NA58 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PNLDC1Q8NA58 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC15.71■□□□□ 0.1
PNLDC1Q8NA58 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PNLDC1Q8NA58 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
PNLDC1Q8NA58 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
PNLDC1Q8NA58 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
PNLDC1Q8NA58 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PNLDC1Q8NA58 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PNLDC1Q8NA58 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC15.7■□□□□ 0.1
PNLDC1Q8NA58 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PNLDC1Q8NA58 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
PNLDC1Q8NA58 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC15.7■□□□□ 0.1
PNLDC1Q8NA58 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PNLDC1Q8NA58 AC113347.1-201ENST00000413321 391 ntBASIC15.7■□□□□ 0.1
PNLDC1Q8NA58 AL137013.1-201ENST00000432946 1228 ntBASIC15.7■□□□□ 0.1
PNLDC1Q8NA58 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
PNLDC1Q8NA58 FAM210CP-201ENST00000445714 574 ntBASIC15.7■□□□□ 0.1
PNLDC1Q8NA58 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
PNLDC1Q8NA58 DUT-205ENST00000558813 769 ntTSL 2 BASIC15.7■□□□□ 0.1
PNLDC1Q8NA58 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC15.7■□□□□ 0.1
PNLDC1Q8NA58 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC15.7■□□□□ 0.1
PNLDC1Q8NA58 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
PNLDC1Q8NA58 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PNLDC1Q8NA58 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
PNLDC1Q8NA58 AC139713.2-201ENST00000641328 2723 ntBASIC15.7■□□□□ 0.1
PNLDC1Q8NA58 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PNLDC1Q8NA58 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PNLDC1Q8NA58 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
PNLDC1Q8NA58 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
PNLDC1Q8NA58 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PNLDC1Q8NA58 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
PNLDC1Q8NA58 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PNLDC1Q8NA58 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
PNLDC1Q8NA58 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PNLDC1Q8NA58 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC15.69■□□□□ 0.1
PNLDC1Q8NA58 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PNLDC1Q8NA58 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PNLDC1Q8NA58 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
PNLDC1Q8NA58 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PNLDC1Q8NA58 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PNLDC1Q8NA58 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PNLDC1Q8NA58 HMGA1P5-201ENST00000412453 271 ntBASIC15.69■□□□□ 0.1
PNLDC1Q8NA58 SLC25A3P1-201ENST00000443844 931 ntBASIC15.69■□□□□ 0.1
PNLDC1Q8NA58 ECEL1P2-202ENST00000465689 757 ntBASIC15.69■□□□□ 0.1
PNLDC1Q8NA58 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC15.69■□□□□ 0.1
PNLDC1Q8NA58 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
PNLDC1Q8NA58 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC15.69■□□□□ 0.1
PNLDC1Q8NA58 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
PNLDC1Q8NA58 AL353719.1-201ENST00000566847 864 ntBASIC15.69■□□□□ 0.1
PNLDC1Q8NA58 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PNLDC1Q8NA58 HLA-DQB1-201ENST00000374943 1656 ntBASIC15.69■□□□□ 0.1
PNLDC1Q8NA58 EML3-212ENST00000494176 2901 ntTSL 2 BASIC15.69■□□□□ 0.1
PNLDC1Q8NA58 EML3-216ENST00000529309 2909 ntTSL 2 BASIC15.69■□□□□ 0.1
PNLDC1Q8NA58 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC15.69■□□□□ 0.1
PNLDC1Q8NA58 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
PNLDC1Q8NA58 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PNLDC1Q8NA58 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PNLDC1Q8NA58 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
PNLDC1Q8NA58 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PNLDC1Q8NA58 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PNLDC1Q8NA58 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC15.68■□□□□ 0.1
PNLDC1Q8NA58 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC15.68■□□□□ 0.1
PNLDC1Q8NA58 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PNLDC1Q8NA58 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC15.68■□□□□ 0.1
PNLDC1Q8NA58 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC15.68■□□□□ 0.1
PNLDC1Q8NA58 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC15.68■□□□□ 0.1
PNLDC1Q8NA58 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC15.68■□□□□ 0.1
PNLDC1Q8NA58 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PNLDC1Q8NA58 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PNLDC1Q8NA58 AC036111.1-201ENST00000533973 1582 ntBASIC15.68■□□□□ 0.1
PNLDC1Q8NA58 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PNLDC1Q8NA58 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
PNLDC1Q8NA58 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC15.68■□□□□ 0.1
PNLDC1Q8NA58 GXYLT1P6-201ENST00000456472 1187 ntBASIC15.68■□□□□ 0.1
PNLDC1Q8NA58 KRT18P21-201ENST00000515767 1272 ntBASIC15.68■□□□□ 0.1
PNLDC1Q8NA58 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PNLDC1Q8NA58 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC15.68■□□□□ 0.1
PNLDC1Q8NA58 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PNLDC1Q8NA58 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
PNLDC1Q8NA58 AC106820.2-201ENST00000563775 3264 ntBASIC15.68■□□□□ 0.1
PNLDC1Q8NA58 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PNLDC1Q8NA58 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms