Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SYNPOQ8N3V7 HOTTIP_1.1-201ENST00000620415 57 ntBASIC18.19■□□□□ 0.5
SYNPOQ8N3V7 PGM5P2-202ENST00000637225 1043 ntBASIC18.19■□□□□ 0.5
SYNPOQ8N3V7 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.19■□□□□ 0.5
SYNPOQ8N3V7 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
SYNPOQ8N3V7 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
SYNPOQ8N3V7 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SYNPOQ8N3V7 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SYNPOQ8N3V7 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SYNPOQ8N3V7 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SYNPOQ8N3V7 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SYNPOQ8N3V7 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.18■□□□□ 0.5
SYNPOQ8N3V7 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SYNPOQ8N3V7 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SYNPOQ8N3V7 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SYNPOQ8N3V7 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SYNPOQ8N3V7 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.18■□□□□ 0.5
SYNPOQ8N3V7 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SYNPOQ8N3V7 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.18■□□□□ 0.5
SYNPOQ8N3V7 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
SYNPOQ8N3V7 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.18■□□□□ 0.5
SYNPOQ8N3V7 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.18■□□□□ 0.5
SYNPOQ8N3V7 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SYNPOQ8N3V7 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
SYNPOQ8N3V7 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
SYNPOQ8N3V7 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SYNPOQ8N3V7 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SYNPOQ8N3V7 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SYNPOQ8N3V7 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SYNPOQ8N3V7 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC18.18■□□□□ 0.5
SYNPOQ8N3V7 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SYNPOQ8N3V7 AC004832.2-201ENST00000426397 482 ntBASIC18.18■□□□□ 0.5
SYNPOQ8N3V7 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC18.18■□□□□ 0.5
SYNPOQ8N3V7 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC18.18■□□□□ 0.5
SYNPOQ8N3V7 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
SYNPOQ8N3V7 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC18.18■□□□□ 0.5
SYNPOQ8N3V7 AC010327.4-202ENST00000591484 748 ntBASIC18.18■□□□□ 0.5
SYNPOQ8N3V7 AP001160.2-201ENST00000596071 487 ntBASIC18.18■□□□□ 0.5
SYNPOQ8N3V7 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
SYNPOQ8N3V7 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.18■□□□□ 0.5
SYNPOQ8N3V7 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SYNPOQ8N3V7 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
SYNPOQ8N3V7 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
SYNPOQ8N3V7 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SYNPOQ8N3V7 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.18■□□□□ 0.5
SYNPOQ8N3V7 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SYNPOQ8N3V7 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
SYNPOQ8N3V7 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SYNPOQ8N3V7 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
SYNPOQ8N3V7 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
SYNPOQ8N3V7 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SYNPOQ8N3V7 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SYNPOQ8N3V7 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.17■□□□□ 0.5
SYNPOQ8N3V7 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SYNPOQ8N3V7 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SYNPOQ8N3V7 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SYNPOQ8N3V7 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SYNPOQ8N3V7 LINC01126-201ENST00000623515 1646 ntBASIC18.17■□□□□ 0.5
SYNPOQ8N3V7 NEFHP1-201ENST00000412845 2629 ntBASIC18.17■□□□□ 0.5
SYNPOQ8N3V7 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
SYNPOQ8N3V7 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SYNPOQ8N3V7 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SYNPOQ8N3V7 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.17■□□□□ 0.5
SYNPOQ8N3V7 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.17■□□□□ 0.5
SYNPOQ8N3V7 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC18.17■□□□□ 0.5
SYNPOQ8N3V7 HS6ST1P1-201ENST00000481504 1234 ntBASIC18.17■□□□□ 0.5
SYNPOQ8N3V7 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC18.17■□□□□ 0.5
SYNPOQ8N3V7 RPS29-206ENST00000557111 488 ntTSL 2 BASIC18.17■□□□□ 0.5
SYNPOQ8N3V7 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.17■□□□□ 0.5
SYNPOQ8N3V7 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC18.17■□□□□ 0.5
SYNPOQ8N3V7 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.17■□□□□ 0.5
SYNPOQ8N3V7 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.17■□□□□ 0.5
SYNPOQ8N3V7 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.17■□□□□ 0.5
SYNPOQ8N3V7 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
SYNPOQ8N3V7 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
SYNPOQ8N3V7 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SYNPOQ8N3V7 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SYNPOQ8N3V7 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.17■□□□□ 0.5
SYNPOQ8N3V7 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SYNPOQ8N3V7 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SYNPOQ8N3V7 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.17■□□□□ 0.5
SYNPOQ8N3V7 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SYNPOQ8N3V7 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SYNPOQ8N3V7 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
SYNPOQ8N3V7 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SYNPOQ8N3V7 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.17■□□□□ 0.5
SYNPOQ8N3V7 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SYNPOQ8N3V7 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SYNPOQ8N3V7 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SYNPOQ8N3V7 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.16■□□□□ 0.5
SYNPOQ8N3V7 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SYNPOQ8N3V7 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SYNPOQ8N3V7 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.16■□□□□ 0.5
SYNPOQ8N3V7 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
SYNPOQ8N3V7 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SYNPOQ8N3V7 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SYNPOQ8N3V7 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC18.16■□□□□ 0.5
SYNPOQ8N3V7 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.16■□□□□ 0.5
SYNPOQ8N3V7 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SYNPOQ8N3V7 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms