Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SCML4Q8N228 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.62■□□□□ 0.57
SCML4Q8N228 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.62■□□□□ 0.57
SCML4Q8N228 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.62■□□□□ 0.57
SCML4Q8N228 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.62■□□□□ 0.57
SCML4Q8N228 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
SCML4Q8N228 AC012313.10-201ENST00000623509 926 ntBASIC18.62■□□□□ 0.57
SCML4Q8N228 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.62■□□□□ 0.57
SCML4Q8N228 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.62■□□□□ 0.57
SCML4Q8N228 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SCML4Q8N228 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.62■□□□□ 0.57
SCML4Q8N228 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SCML4Q8N228 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SCML4Q8N228 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SCML4Q8N228 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SCML4Q8N228 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SCML4Q8N228 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
SCML4Q8N228 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.61■□□□□ 0.57
SCML4Q8N228 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SCML4Q8N228 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SCML4Q8N228 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.61■□□□□ 0.57
SCML4Q8N228 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SCML4Q8N228 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SCML4Q8N228 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
SCML4Q8N228 AC009949.1-201ENST00000623048 1830 ntBASIC18.61■□□□□ 0.57
SCML4Q8N228 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SCML4Q8N228 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SCML4Q8N228 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SCML4Q8N228 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SCML4Q8N228 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
SCML4Q8N228 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
SCML4Q8N228 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SCML4Q8N228 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SCML4Q8N228 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.61■□□□□ 0.57
SCML4Q8N228 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC18.61■□□□□ 0.57
SCML4Q8N228 KRT126P-201ENST00000549467 1181 ntBASIC18.61■□□□□ 0.57
SCML4Q8N228 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.61■□□□□ 0.57
SCML4Q8N228 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.61■□□□□ 0.57
SCML4Q8N228 AC138894.3-201ENST00000603787 634 ntBASIC18.61■□□□□ 0.57
SCML4Q8N228 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SCML4Q8N228 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
SCML4Q8N228 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SCML4Q8N228 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SCML4Q8N228 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SCML4Q8N228 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SCML4Q8N228 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SCML4Q8N228 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
SCML4Q8N228 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SCML4Q8N228 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SCML4Q8N228 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SCML4Q8N228 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
SCML4Q8N228 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SCML4Q8N228 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SCML4Q8N228 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
SCML4Q8N228 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SCML4Q8N228 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
SCML4Q8N228 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
SCML4Q8N228 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SCML4Q8N228 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.6■□□□□ 0.57
SCML4Q8N228 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SCML4Q8N228 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SCML4Q8N228 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SCML4Q8N228 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.6■□□□□ 0.57
SCML4Q8N228 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.6■□□□□ 0.57
SCML4Q8N228 AC103564.2-201ENST00000432853 1299 ntBASIC18.6■□□□□ 0.57
SCML4Q8N228 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.6■□□□□ 0.57
SCML4Q8N228 AC091304.2-201ENST00000564639 760 ntBASIC18.6■□□□□ 0.57
SCML4Q8N228 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.6■□□□□ 0.57
SCML4Q8N228 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
SCML4Q8N228 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SCML4Q8N228 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.6■□□□□ 0.57
SCML4Q8N228 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.6■□□□□ 0.57
SCML4Q8N228 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
SCML4Q8N228 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SCML4Q8N228 NEFHP1-201ENST00000412845 2629 ntBASIC18.6■□□□□ 0.57
SCML4Q8N228 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SCML4Q8N228 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SCML4Q8N228 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SCML4Q8N228 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.6■□□□□ 0.57
SCML4Q8N228 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SCML4Q8N228 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SCML4Q8N228 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.6■□□□□ 0.57
SCML4Q8N228 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SCML4Q8N228 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
SCML4Q8N228 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SCML4Q8N228 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SCML4Q8N228 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
SCML4Q8N228 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SCML4Q8N228 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SCML4Q8N228 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
SCML4Q8N228 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.59■□□□□ 0.57
SCML4Q8N228 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SCML4Q8N228 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.59■□□□□ 0.57
SCML4Q8N228 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.59■□□□□ 0.57
SCML4Q8N228 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SCML4Q8N228 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SCML4Q8N228 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SCML4Q8N228 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SCML4Q8N228 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SCML4Q8N228 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms