Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.93■□□□□ 0.78
CCDC65Q8IXS2 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CCDC65Q8IXS2 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC65Q8IXS2 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC65Q8IXS2 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.93■□□□□ 0.78
CCDC65Q8IXS2 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC65Q8IXS2 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CCDC65Q8IXS2 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC65Q8IXS2 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC65Q8IXS2 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC65Q8IXS2 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC19.93■□□□□ 0.78
CCDC65Q8IXS2 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC65Q8IXS2 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC65Q8IXS2 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC65Q8IXS2 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC65Q8IXS2 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.93■□□□□ 0.78
CCDC65Q8IXS2 AL390719.2-201ENST00000606993 987 ntBASIC19.93■□□□□ 0.78
CCDC65Q8IXS2 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CCDC65Q8IXS2 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC65Q8IXS2 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC65Q8IXS2 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC65Q8IXS2 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC65Q8IXS2 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC65Q8IXS2 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC65Q8IXS2 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC65Q8IXS2 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CCDC65Q8IXS2 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC65Q8IXS2 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC65Q8IXS2 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC65Q8IXS2 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
CCDC65Q8IXS2 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC65Q8IXS2 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CCDC65Q8IXS2 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CCDC65Q8IXS2 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.92■□□□□ 0.78
CCDC65Q8IXS2 AC006116.8-202ENST00000587620 1550 ntBASIC19.92■□□□□ 0.78
CCDC65Q8IXS2 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.92■□□□□ 0.78
CCDC65Q8IXS2 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC19.92■□□□□ 0.78
CCDC65Q8IXS2 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC65Q8IXS2 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.92■□□□□ 0.78
CCDC65Q8IXS2 Z83836.1-201ENST00000624605 1642 ntBASIC19.92■□□□□ 0.78
CCDC65Q8IXS2 AL645929.1-201ENST00000420084 975 ntBASIC19.92■□□□□ 0.78
CCDC65Q8IXS2 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC19.92■□□□□ 0.78
CCDC65Q8IXS2 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.92■□□□□ 0.78
CCDC65Q8IXS2 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC19.92■□□□□ 0.78
CCDC65Q8IXS2 RNF126P1-202ENST00000569893 925 ntBASIC19.92■□□□□ 0.78
CCDC65Q8IXS2 ANKRD20A8P-203ENST00000641373 517 ntBASIC19.92■□□□□ 0.78
CCDC65Q8IXS2 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC65Q8IXS2 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CCDC65Q8IXS2 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CCDC65Q8IXS2 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CCDC65Q8IXS2 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC65Q8IXS2 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC65Q8IXS2 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CCDC65Q8IXS2 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC65Q8IXS2 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC19.92■□□□□ 0.78
CCDC65Q8IXS2 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC65Q8IXS2 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC65Q8IXS2 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC65Q8IXS2 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC65Q8IXS2 GNE-204ENST00000539208 2190 ntTSL 2 BASIC19.91■□□□□ 0.78
CCDC65Q8IXS2 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CCDC65Q8IXS2 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC65Q8IXS2 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC65Q8IXS2 AC012317.2-201ENST00000623305 2251 ntBASIC19.91■□□□□ 0.78
CCDC65Q8IXS2 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC19.91■□□□□ 0.78
CCDC65Q8IXS2 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CCDC65Q8IXS2 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC65Q8IXS2 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC19.91■□□□□ 0.78
CCDC65Q8IXS2 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC65Q8IXS2 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.91■□□□□ 0.78
CCDC65Q8IXS2 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC65Q8IXS2 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC65Q8IXS2 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC65Q8IXS2 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC65Q8IXS2 BAALC-202ENST00000306391 243 ntTSL 5 BASIC19.91■□□□□ 0.78
CCDC65Q8IXS2 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC65Q8IXS2 BAALC-204ENST00000330955 222 ntTSL 5 BASIC19.91■□□□□ 0.78
CCDC65Q8IXS2 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC65Q8IXS2 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.91■□□□□ 0.78
CCDC65Q8IXS2 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.91■□□□□ 0.78
CCDC65Q8IXS2 AC116407.2-201ENST00000613639 860 ntBASIC19.91■□□□□ 0.78
CCDC65Q8IXS2 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC65Q8IXS2 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC19.91■□□□□ 0.78
CCDC65Q8IXS2 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC65Q8IXS2 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC19.91■□□□□ 0.78
CCDC65Q8IXS2 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CCDC65Q8IXS2 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC65Q8IXS2 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC65Q8IXS2 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CCDC65Q8IXS2 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CCDC65Q8IXS2 NME9-203ENST00000383180 2133 ntTSL 2 BASIC19.91■□□□□ 0.78
CCDC65Q8IXS2 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC65Q8IXS2 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC65Q8IXS2 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC65Q8IXS2 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC65Q8IXS2 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC65Q8IXS2 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC65Q8IXS2 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC65Q8IXS2 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.9■□□□□ 0.78
CCDC65Q8IXS2 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms