Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 LINC01711-201ENST00000598340 967 ntBASIC17.61■□□□□ 0.41
TRIM48Q8IWZ4 AC099336.1-202ENST00000602961 463 ntBASIC17.61■□□□□ 0.41
TRIM48Q8IWZ4 AC138894.3-201ENST00000603787 634 ntBASIC17.61■□□□□ 0.41
TRIM48Q8IWZ4 AC009154.2-201ENST00000621177 724 ntBASIC17.61■□□□□ 0.41
TRIM48Q8IWZ4 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM48Q8IWZ4 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM48Q8IWZ4 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM48Q8IWZ4 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM48Q8IWZ4 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM48Q8IWZ4 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
TRIM48Q8IWZ4 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM48Q8IWZ4 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM48Q8IWZ4 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
TRIM48Q8IWZ4 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM48Q8IWZ4 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM48Q8IWZ4 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM48Q8IWZ4 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.6■□□□□ 0.41
TRIM48Q8IWZ4 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM48Q8IWZ4 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM48Q8IWZ4 WIZP1-201ENST00000531444 2299 ntBASIC17.6■□□□□ 0.41
TRIM48Q8IWZ4 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM48Q8IWZ4 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM48Q8IWZ4 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.6■□□□□ 0.41
TRIM48Q8IWZ4 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
TRIM48Q8IWZ4 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.6■□□□□ 0.41
TRIM48Q8IWZ4 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM48Q8IWZ4 AC246785.2-201ENST00000432512 513 ntBASIC17.6■□□□□ 0.41
TRIM48Q8IWZ4 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.6■□□□□ 0.41
TRIM48Q8IWZ4 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.6■□□□□ 0.41
TRIM48Q8IWZ4 AL121772.3-201ENST00000610840 674 ntBASIC17.6■□□□□ 0.41
TRIM48Q8IWZ4 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM48Q8IWZ4 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM48Q8IWZ4 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
TRIM48Q8IWZ4 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM48Q8IWZ4 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM48Q8IWZ4 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.6■□□□□ 0.41
TRIM48Q8IWZ4 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM48Q8IWZ4 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.6■□□□□ 0.41
TRIM48Q8IWZ4 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM48Q8IWZ4 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM48Q8IWZ4 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
TRIM48Q8IWZ4 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM48Q8IWZ4 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM48Q8IWZ4 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
TRIM48Q8IWZ4 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM48Q8IWZ4 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM48Q8IWZ4 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM48Q8IWZ4 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
TRIM48Q8IWZ4 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM48Q8IWZ4 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM48Q8IWZ4 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM48Q8IWZ4 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.59■□□□□ 0.41
TRIM48Q8IWZ4 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM48Q8IWZ4 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM48Q8IWZ4 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.59■□□□□ 0.41
TRIM48Q8IWZ4 FOSL1P1-201ENST00000511041 816 ntBASIC17.59■□□□□ 0.41
TRIM48Q8IWZ4 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM48Q8IWZ4 AC111152.3-201ENST00000569699 673 ntBASIC17.59■□□□□ 0.41
TRIM48Q8IWZ4 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.59■□□□□ 0.41
TRIM48Q8IWZ4 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.59■□□□□ 0.41
TRIM48Q8IWZ4 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM48Q8IWZ4 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.59■□□□□ 0.41
TRIM48Q8IWZ4 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM48Q8IWZ4 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM48Q8IWZ4 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM48Q8IWZ4 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM48Q8IWZ4 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
TRIM48Q8IWZ4 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM48Q8IWZ4 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM48Q8IWZ4 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM48Q8IWZ4 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM48Q8IWZ4 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.59■□□□□ 0.41
TRIM48Q8IWZ4 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM48Q8IWZ4 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM48Q8IWZ4 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.59■□□□□ 0.41
TRIM48Q8IWZ4 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM48Q8IWZ4 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRIM48Q8IWZ4 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRIM48Q8IWZ4 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.41
TRIM48Q8IWZ4 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRIM48Q8IWZ4 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TRIM48Q8IWZ4 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRIM48Q8IWZ4 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRIM48Q8IWZ4 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TRIM48Q8IWZ4 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
TRIM48Q8IWZ4 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM48Q8IWZ4 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
TRIM48Q8IWZ4 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM48Q8IWZ4 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.58■□□□□ 0.4
TRIM48Q8IWZ4 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.58■□□□□ 0.4
TRIM48Q8IWZ4 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM48Q8IWZ4 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.58■□□□□ 0.4
TRIM48Q8IWZ4 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM48Q8IWZ4 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.58■□□□□ 0.4
TRIM48Q8IWZ4 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.58■□□□□ 0.4
TRIM48Q8IWZ4 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM48Q8IWZ4 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.58■□□□□ 0.4
TRIM48Q8IWZ4 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM48Q8IWZ4 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
TRIM48Q8IWZ4 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms