Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM50Q86XT4 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
TRIM50Q86XT4 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM50Q86XT4 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.96■□□□□ 0.79
TRIM50Q86XT4 AC018445.3-201ENST00000624177 1945 ntBASIC19.96■□□□□ 0.79
TRIM50Q86XT4 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM50Q86XT4 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC19.96■□□□□ 0.79
TRIM50Q86XT4 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM50Q86XT4 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
TRIM50Q86XT4 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM50Q86XT4 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM50Q86XT4 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM50Q86XT4 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM50Q86XT4 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM50Q86XT4 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM50Q86XT4 TEX30-205ENST00000376029 959 ntTSL 2 BASIC19.96■□□□□ 0.79
TRIM50Q86XT4 AC007967.3-201ENST00000434308 558 ntBASIC19.96■□□□□ 0.79
TRIM50Q86XT4 ABCD1P5-201ENST00000445663 754 ntBASIC19.96■□□□□ 0.79
TRIM50Q86XT4 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC19.96■□□□□ 0.79
TRIM50Q86XT4 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC19.96■□□□□ 0.79
TRIM50Q86XT4 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM50Q86XT4 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM50Q86XT4 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC19.96■□□□□ 0.79
TRIM50Q86XT4 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM50Q86XT4 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
TRIM50Q86XT4 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM50Q86XT4 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.96■□□□□ 0.79
TRIM50Q86XT4 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM50Q86XT4 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM50Q86XT4 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.95■□□□□ 0.79
TRIM50Q86XT4 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.95■□□□□ 0.78
TRIM50Q86XT4 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM50Q86XT4 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM50Q86XT4 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM50Q86XT4 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC19.95■□□□□ 0.78
TRIM50Q86XT4 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM50Q86XT4 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM50Q86XT4 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM50Q86XT4 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM50Q86XT4 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM50Q86XT4 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC19.95■□□□□ 0.78
TRIM50Q86XT4 TLE1-202ENST00000376484 666 ntTSL 3 BASIC19.95■□□□□ 0.78
TRIM50Q86XT4 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM50Q86XT4 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC19.95■□□□□ 0.78
TRIM50Q86XT4 AC073648.2-201ENST00000510116 352 ntBASIC19.95■□□□□ 0.78
TRIM50Q86XT4 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC19.95■□□□□ 0.78
TRIM50Q86XT4 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC19.95■□□□□ 0.78
TRIM50Q86XT4 FAM215A-202ENST00000632077 792 ntBASIC19.95■□□□□ 0.78
TRIM50Q86XT4 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM50Q86XT4 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
TRIM50Q86XT4 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM50Q86XT4 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM50Q86XT4 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM50Q86XT4 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM50Q86XT4 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
TRIM50Q86XT4 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM50Q86XT4 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
TRIM50Q86XT4 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.95■□□□□ 0.78
TRIM50Q86XT4 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.95■□□□□ 0.78
TRIM50Q86XT4 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
TRIM50Q86XT4 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM50Q86XT4 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.94■□□□□ 0.78
TRIM50Q86XT4 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
TRIM50Q86XT4 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM50Q86XT4 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
TRIM50Q86XT4 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM50Q86XT4 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM50Q86XT4 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM50Q86XT4 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
TRIM50Q86XT4 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC19.94■□□□□ 0.78
TRIM50Q86XT4 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
TRIM50Q86XT4 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM50Q86XT4 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC19.94■□□□□ 0.78
TRIM50Q86XT4 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
TRIM50Q86XT4 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
TRIM50Q86XT4 AF228730.7-201ENST00000641842 219 ntBASIC19.94■□□□□ 0.78
TRIM50Q86XT4 AC010460.3-201ENST00000511359 1579 ntBASIC19.94■□□□□ 0.78
TRIM50Q86XT4 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM50Q86XT4 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM50Q86XT4 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM50Q86XT4 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.94■□□□□ 0.78
TRIM50Q86XT4 AL096828.2-201ENST00000567259 1965 ntBASIC19.94■□□□□ 0.78
TRIM50Q86XT4 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM50Q86XT4 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
TRIM50Q86XT4 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM50Q86XT4 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.93■□□□□ 0.78
TRIM50Q86XT4 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM50Q86XT4 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
TRIM50Q86XT4 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM50Q86XT4 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC19.93■□□□□ 0.78
TRIM50Q86XT4 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM50Q86XT4 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
TRIM50Q86XT4 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
TRIM50Q86XT4 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM50Q86XT4 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC19.93■□□□□ 0.78
TRIM50Q86XT4 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC19.93■□□□□ 0.78
TRIM50Q86XT4 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC19.93■□□□□ 0.78
TRIM50Q86XT4 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC19.93■□□□□ 0.78
TRIM50Q86XT4 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC19.93■□□□□ 0.78
TRIM50Q86XT4 AC021087.4-201ENST00000563761 564 ntBASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms