Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRRTM4Q86VH4 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LRRTM4Q86VH4 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.59■□□□□ 0.41
LRRTM4Q86VH4 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRRTM4Q86VH4 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
LRRTM4Q86VH4 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
LRRTM4Q86VH4 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.58■□□□□ 0.41
LRRTM4Q86VH4 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
LRRTM4Q86VH4 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
LRRTM4Q86VH4 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
LRRTM4Q86VH4 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.58■□□□□ 0.41
LRRTM4Q86VH4 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.41
LRRTM4Q86VH4 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LRRTM4Q86VH4 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.58■□□□□ 0.41
LRRTM4Q86VH4 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LRRTM4Q86VH4 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
LRRTM4Q86VH4 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LRRTM4Q86VH4 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
LRRTM4Q86VH4 KRT8P47-201ENST00000604727 1398 ntBASIC17.58■□□□□ 0.4
LRRTM4Q86VH4 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
LRRTM4Q86VH4 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.58■□□□□ 0.4
LRRTM4Q86VH4 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
LRRTM4Q86VH4 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LRRTM4Q86VH4 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
LRRTM4Q86VH4 NUS1P2-201ENST00000417358 873 ntBASIC17.58■□□□□ 0.4
LRRTM4Q86VH4 TSPY19P-201ENST00000418461 509 ntBASIC17.58■□□□□ 0.4
LRRTM4Q86VH4 TSPY18P-201ENST00000441642 509 ntBASIC17.58■□□□□ 0.4
LRRTM4Q86VH4 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.58■□□□□ 0.4
LRRTM4Q86VH4 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.58■□□□□ 0.4
LRRTM4Q86VH4 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.58■□□□□ 0.4
LRRTM4Q86VH4 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.58■□□□□ 0.4
LRRTM4Q86VH4 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.58■□□□□ 0.4
LRRTM4Q86VH4 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.58■□□□□ 0.4
LRRTM4Q86VH4 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.58■□□□□ 0.4
LRRTM4Q86VH4 AC091304.2-201ENST00000564639 760 ntBASIC17.58■□□□□ 0.4
LRRTM4Q86VH4 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.58■□□□□ 0.4
LRRTM4Q86VH4 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.58■□□□□ 0.4
LRRTM4Q86VH4 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
LRRTM4Q86VH4 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LRRTM4Q86VH4 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.58■□□□□ 0.4
LRRTM4Q86VH4 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
LRRTM4Q86VH4 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.58■□□□□ 0.4
LRRTM4Q86VH4 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LRRTM4Q86VH4 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
LRRTM4Q86VH4 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
LRRTM4Q86VH4 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LRRTM4Q86VH4 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
LRRTM4Q86VH4 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
LRRTM4Q86VH4 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRTM4Q86VH4 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
LRRTM4Q86VH4 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRTM4Q86VH4 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LRRTM4Q86VH4 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LRRTM4Q86VH4 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.57■□□□□ 0.4
LRRTM4Q86VH4 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.57■□□□□ 0.4
LRRTM4Q86VH4 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRTM4Q86VH4 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
LRRTM4Q86VH4 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.57■□□□□ 0.4
LRRTM4Q86VH4 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRTM4Q86VH4 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LRRTM4Q86VH4 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LRRTM4Q86VH4 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRTM4Q86VH4 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRTM4Q86VH4 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRTM4Q86VH4 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
LRRTM4Q86VH4 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.57■□□□□ 0.4
LRRTM4Q86VH4 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LRRTM4Q86VH4 AP000997.3-201ENST00000623333 2250 ntBASIC17.57■□□□□ 0.4
LRRTM4Q86VH4 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRTM4Q86VH4 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRTM4Q86VH4 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRTM4Q86VH4 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
LRRTM4Q86VH4 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.57■□□□□ 0.4
LRRTM4Q86VH4 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LRRTM4Q86VH4 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRTM4Q86VH4 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LRRTM4Q86VH4 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.57■□□□□ 0.4
LRRTM4Q86VH4 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRTM4Q86VH4 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.57■□□□□ 0.4
LRRTM4Q86VH4 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRTM4Q86VH4 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRTM4Q86VH4 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.57■□□□□ 0.4
LRRTM4Q86VH4 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRTM4Q86VH4 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.56■□□□□ 0.4
LRRTM4Q86VH4 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRTM4Q86VH4 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.56■□□□□ 0.4
LRRTM4Q86VH4 AC135050.7-201ENST00000624508 2218 ntBASIC17.56■□□□□ 0.4
LRRTM4Q86VH4 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRTM4Q86VH4 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRTM4Q86VH4 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRRTM4Q86VH4 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.56■□□□□ 0.4
LRRTM4Q86VH4 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRTM4Q86VH4 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRTM4Q86VH4 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRTM4Q86VH4 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRTM4Q86VH4 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRRTM4Q86VH4 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRTM4Q86VH4 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRRTM4Q86VH4 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.56■□□□□ 0.4
LRRTM4Q86VH4 KRT16P4-201ENST00000453883 522 ntBASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms