Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 AL096828.2-201ENST00000567259 1965 ntBASIC11□□□□□ -0.65
VPS13BQ7Z7G8 AC097374.2-201ENST00000618617 1306 ntBASIC11□□□□□ -0.65
VPS13BQ7Z7G8 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
VPS13BQ7Z7G8 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC11□□□□□ -0.65
VPS13BQ7Z7G8 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC11□□□□□ -0.65
VPS13BQ7Z7G8 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
VPS13BQ7Z7G8 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC11□□□□□ -0.65
VPS13BQ7Z7G8 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC11□□□□□ -0.65
VPS13BQ7Z7G8 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC11□□□□□ -0.65
VPS13BQ7Z7G8 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC11□□□□□ -0.65
VPS13BQ7Z7G8 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC11□□□□□ -0.65
VPS13BQ7Z7G8 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC11□□□□□ -0.65
VPS13BQ7Z7G8 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC11□□□□□ -0.65
VPS13BQ7Z7G8 RBM7-207ENST00000544582 692 ntTSL 3 BASIC11□□□□□ -0.65
VPS13BQ7Z7G8 IGHV3OR16-6-201ENST00000568775 360 ntBASIC11□□□□□ -0.65
VPS13BQ7Z7G8 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC11□□□□□ -0.65
VPS13BQ7Z7G8 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC11□□□□□ -0.65
VPS13BQ7Z7G8 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
VPS13BQ7Z7G8 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
VPS13BQ7Z7G8 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC10.99□□□□□ -0.65
VPS13BQ7Z7G8 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC10.99□□□□□ -0.65
VPS13BQ7Z7G8 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC10.99□□□□□ -0.65
VPS13BQ7Z7G8 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC10.99□□□□□ -0.65
VPS13BQ7Z7G8 PRSS29P-201ENST00000440800 595 ntBASIC10.99□□□□□ -0.65
VPS13BQ7Z7G8 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC10.99□□□□□ -0.65
VPS13BQ7Z7G8 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC10.99□□□□□ -0.65
VPS13BQ7Z7G8 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC10.99□□□□□ -0.65
VPS13BQ7Z7G8 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC10.99□□□□□ -0.65
VPS13BQ7Z7G8 CYB561-217ENST00000582997 877 ntTSL 5 BASIC10.99□□□□□ -0.65
VPS13BQ7Z7G8 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC10.99□□□□□ -0.65
VPS13BQ7Z7G8 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC10.99□□□□□ -0.65
VPS13BQ7Z7G8 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
VPS13BQ7Z7G8 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC10.99□□□□□ -0.65
VPS13BQ7Z7G8 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC10.99□□□□□ -0.65
VPS13BQ7Z7G8 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
VPS13BQ7Z7G8 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
VPS13BQ7Z7G8 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC10.99□□□□□ -0.65
VPS13BQ7Z7G8 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC10.99□□□□□ -0.65
VPS13BQ7Z7G8 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
VPS13BQ7Z7G8 METTL26-204ENST00000397665 558 ntTSL 2 BASIC10.99□□□□□ -0.65
VPS13BQ7Z7G8 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
VPS13BQ7Z7G8 PAWRP1-201ENST00000451083 565 ntBASIC10.99□□□□□ -0.65
VPS13BQ7Z7G8 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC10.99□□□□□ -0.65
VPS13BQ7Z7G8 PUS1-205ENST00000535067 838 ntTSL 3 BASIC10.99□□□□□ -0.65
VPS13BQ7Z7G8 RIN3-211ENST00000557762 517 ntTSL 3 BASIC10.99□□□□□ -0.65
VPS13BQ7Z7G8 TCAP-202ENST00000578283 583 ntTSL 5 BASIC10.99□□□□□ -0.65
VPS13BQ7Z7G8 AC093512.1-201ENST00000617969 520 ntBASIC10.99□□□□□ -0.65
VPS13BQ7Z7G8 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
VPS13BQ7Z7G8 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
VPS13BQ7Z7G8 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
VPS13BQ7Z7G8 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
VPS13BQ7Z7G8 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC10.99□□□□□ -0.65
VPS13BQ7Z7G8 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC10.99□□□□□ -0.65
VPS13BQ7Z7G8 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
VPS13BQ7Z7G8 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
VPS13BQ7Z7G8 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
VPS13BQ7Z7G8 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC10.99□□□□□ -0.65
VPS13BQ7Z7G8 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC10.99□□□□□ -0.65
VPS13BQ7Z7G8 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC10.99□□□□□ -0.65
VPS13BQ7Z7G8 GAPDHP21-201ENST00000450301 1010 ntBASIC10.99□□□□□ -0.65
VPS13BQ7Z7G8 NMU-203ENST00000507338 658 ntTSL 3 BASIC10.99□□□□□ -0.65
VPS13BQ7Z7G8 AC136632.2-201ENST00000512891 861 ntBASIC10.99□□□□□ -0.65
VPS13BQ7Z7G8 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
VPS13BQ7Z7G8 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC10.99□□□□□ -0.65
VPS13BQ7Z7G8 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC10.99□□□□□ -0.65
VPS13BQ7Z7G8 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
VPS13BQ7Z7G8 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC10.98□□□□□ -0.65
VPS13BQ7Z7G8 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC10.98□□□□□ -0.65
VPS13BQ7Z7G8 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC10.98□□□□□ -0.65
VPS13BQ7Z7G8 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
VPS13BQ7Z7G8 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
VPS13BQ7Z7G8 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
VPS13BQ7Z7G8 PHGDH-209ENST00000641074 1780 ntBASIC10.98□□□□□ -0.65
VPS13BQ7Z7G8 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC10.98□□□□□ -0.65
VPS13BQ7Z7G8 UGT1A2P-201ENST00000454886 866 ntBASIC10.98□□□□□ -0.65
VPS13BQ7Z7G8 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
VPS13BQ7Z7G8 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC10.98□□□□□ -0.65
VPS13BQ7Z7G8 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
VPS13BQ7Z7G8 AC005225.4-201ENST00000557330 545 ntBASIC10.98□□□□□ -0.65
VPS13BQ7Z7G8 AC087641.1-201ENST00000557561 1021 ntBASIC10.98□□□□□ -0.65
VPS13BQ7Z7G8 AC011467.4-201ENST00000594891 528 ntBASIC10.98□□□□□ -0.65
VPS13BQ7Z7G8 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
VPS13BQ7Z7G8 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
VPS13BQ7Z7G8 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
VPS13BQ7Z7G8 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
VPS13BQ7Z7G8 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC10.98□□□□□ -0.65
VPS13BQ7Z7G8 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
VPS13BQ7Z7G8 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
VPS13BQ7Z7G8 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC10.98□□□□□ -0.65
VPS13BQ7Z7G8 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
VPS13BQ7Z7G8 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
VPS13BQ7Z7G8 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC10.98□□□□□ -0.65
VPS13BQ7Z7G8 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
VPS13BQ7Z7G8 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
VPS13BQ7Z7G8 SOD2-201ENST00000337404 991 ntTSL 2 BASIC10.98□□□□□ -0.65
VPS13BQ7Z7G8 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
VPS13BQ7Z7G8 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
VPS13BQ7Z7G8 CEND1P1-201ENST00000451006 455 ntBASIC10.98□□□□□ -0.65
VPS13BQ7Z7G8 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC10.98□□□□□ -0.65
VPS13BQ7Z7G8 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC10.98□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms