Protein–RNA interactions for Protein: Q7L7L0

HIST3H2A, Histone H2A type 3, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2AQ7L7L0 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HIST3H2AQ7L7L0 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HIST3H2AQ7L7L0 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HIST3H2AQ7L7L0 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HIST3H2AQ7L7L0 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HIST3H2AQ7L7L0 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HIST3H2AQ7L7L0 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HIST3H2AQ7L7L0 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
HIST3H2AQ7L7L0 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.39■□□□□ 0.21
HIST3H2AQ7L7L0 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.39■□□□□ 0.21
HIST3H2AQ7L7L0 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.39■□□□□ 0.21
HIST3H2AQ7L7L0 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.39■□□□□ 0.21
HIST3H2AQ7L7L0 AC034232.1-201ENST00000506026 1064 ntBASIC16.39■□□□□ 0.21
HIST3H2AQ7L7L0 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.39■□□□□ 0.21
HIST3H2AQ7L7L0 MIR3917-201ENST00000580971 93 ntBASIC16.39■□□□□ 0.21
HIST3H2AQ7L7L0 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HIST3H2AQ7L7L0 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
HIST3H2AQ7L7L0 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
HIST3H2AQ7L7L0 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HIST3H2AQ7L7L0 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HIST3H2AQ7L7L0 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
HIST3H2AQ7L7L0 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HIST3H2AQ7L7L0 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HIST3H2AQ7L7L0 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HIST3H2AQ7L7L0 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
HIST3H2AQ7L7L0 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HIST3H2AQ7L7L0 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.38■□□□□ 0.21
HIST3H2AQ7L7L0 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HIST3H2AQ7L7L0 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.38■□□□□ 0.21
HIST3H2AQ7L7L0 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
HIST3H2AQ7L7L0 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HIST3H2AQ7L7L0 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HIST3H2AQ7L7L0 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.38■□□□□ 0.21
HIST3H2AQ7L7L0 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HIST3H2AQ7L7L0 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HIST3H2AQ7L7L0 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HIST3H2AQ7L7L0 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HIST3H2AQ7L7L0 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HIST3H2AQ7L7L0 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HIST3H2AQ7L7L0 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC16.38■□□□□ 0.21
HIST3H2AQ7L7L0 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC16.38■□□□□ 0.21
HIST3H2AQ7L7L0 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.38■□□□□ 0.21
HIST3H2AQ7L7L0 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.38■□□□□ 0.21
HIST3H2AQ7L7L0 AC141257.4-201ENST00000634557 245 ntBASIC16.38■□□□□ 0.21
HIST3H2AQ7L7L0 AC136944.6-201ENST00000634818 245 ntBASIC16.38■□□□□ 0.21
HIST3H2AQ7L7L0 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
HIST3H2AQ7L7L0 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HIST3H2AQ7L7L0 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
HIST3H2AQ7L7L0 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HIST3H2AQ7L7L0 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HIST3H2AQ7L7L0 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HIST3H2AQ7L7L0 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
HIST3H2AQ7L7L0 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
HIST3H2AQ7L7L0 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
HIST3H2AQ7L7L0 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HIST3H2AQ7L7L0 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
HIST3H2AQ7L7L0 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HIST3H2AQ7L7L0 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
HIST3H2AQ7L7L0 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.38■□□□□ 0.21
HIST3H2AQ7L7L0 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
HIST3H2AQ7L7L0 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HIST3H2AQ7L7L0 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HIST3H2AQ7L7L0 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
HIST3H2AQ7L7L0 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
HIST3H2AQ7L7L0 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HIST3H2AQ7L7L0 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
HIST3H2AQ7L7L0 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HIST3H2AQ7L7L0 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
HIST3H2AQ7L7L0 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HIST3H2AQ7L7L0 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
HIST3H2AQ7L7L0 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
HIST3H2AQ7L7L0 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HIST3H2AQ7L7L0 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.37■□□□□ 0.21
HIST3H2AQ7L7L0 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HIST3H2AQ7L7L0 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
HIST3H2AQ7L7L0 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HIST3H2AQ7L7L0 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HIST3H2AQ7L7L0 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.37■□□□□ 0.21
HIST3H2AQ7L7L0 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HIST3H2AQ7L7L0 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HIST3H2AQ7L7L0 AC087499.1-201ENST00000418141 1075 ntBASIC16.37■□□□□ 0.21
HIST3H2AQ7L7L0 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.37■□□□□ 0.21
HIST3H2AQ7L7L0 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.37■□□□□ 0.21
HIST3H2AQ7L7L0 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.37■□□□□ 0.21
HIST3H2AQ7L7L0 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HIST3H2AQ7L7L0 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC16.37■□□□□ 0.21
HIST3H2AQ7L7L0 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HIST3H2AQ7L7L0 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
HIST3H2AQ7L7L0 AC145285.6-201ENST00000604632 637 ntBASIC16.37■□□□□ 0.21
HIST3H2AQ7L7L0 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HIST3H2AQ7L7L0 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HIST3H2AQ7L7L0 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
HIST3H2AQ7L7L0 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.37■□□□□ 0.21
HIST3H2AQ7L7L0 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HIST3H2AQ7L7L0 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HIST3H2AQ7L7L0 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
HIST3H2AQ7L7L0 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
HIST3H2AQ7L7L0 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HIST3H2AQ7L7L0 AC134043.2-201ENST00000624206 2238 ntBASIC16.37■□□□□ 0.21
HIST3H2AQ7L7L0 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms