Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RTL4Q6ZR62 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RTL4Q6ZR62 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.84■□□□□ 0.29
RTL4Q6ZR62 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RTL4Q6ZR62 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RTL4Q6ZR62 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
RTL4Q6ZR62 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RTL4Q6ZR62 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RTL4Q6ZR62 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
RTL4Q6ZR62 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
RTL4Q6ZR62 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
RTL4Q6ZR62 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
RTL4Q6ZR62 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
RTL4Q6ZR62 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.83■□□□□ 0.28
RTL4Q6ZR62 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RTL4Q6ZR62 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
RTL4Q6ZR62 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.83■□□□□ 0.28
RTL4Q6ZR62 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
RTL4Q6ZR62 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RTL4Q6ZR62 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.83■□□□□ 0.28
RTL4Q6ZR62 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.83■□□□□ 0.28
RTL4Q6ZR62 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RTL4Q6ZR62 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RTL4Q6ZR62 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.83■□□□□ 0.28
RTL4Q6ZR62 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RTL4Q6ZR62 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RTL4Q6ZR62 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RTL4Q6ZR62 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.83■□□□□ 0.28
RTL4Q6ZR62 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.83■□□□□ 0.28
RTL4Q6ZR62 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RTL4Q6ZR62 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RTL4Q6ZR62 KRT8P26-201ENST00000534154 1276 ntBASIC16.83■□□□□ 0.28
RTL4Q6ZR62 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.83■□□□□ 0.28
RTL4Q6ZR62 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.83■□□□□ 0.28
RTL4Q6ZR62 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.83■□□□□ 0.28
RTL4Q6ZR62 AC008687.5-201ENST00000593746 558 ntBASIC16.83■□□□□ 0.28
RTL4Q6ZR62 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
RTL4Q6ZR62 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
RTL4Q6ZR62 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
RTL4Q6ZR62 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RTL4Q6ZR62 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RTL4Q6ZR62 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RTL4Q6ZR62 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RTL4Q6ZR62 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RTL4Q6ZR62 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
RTL4Q6ZR62 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RTL4Q6ZR62 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
RTL4Q6ZR62 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.82■□□□□ 0.28
RTL4Q6ZR62 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RTL4Q6ZR62 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RTL4Q6ZR62 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RTL4Q6ZR62 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RTL4Q6ZR62 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RTL4Q6ZR62 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.82■□□□□ 0.28
RTL4Q6ZR62 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.82■□□□□ 0.28
RTL4Q6ZR62 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RTL4Q6ZR62 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RTL4Q6ZR62 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RTL4Q6ZR62 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RTL4Q6ZR62 TSPY22P-201ENST00000427496 604 ntBASIC16.82■□□□□ 0.28
RTL4Q6ZR62 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RTL4Q6ZR62 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.82■□□□□ 0.28
RTL4Q6ZR62 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.82■□□□□ 0.28
RTL4Q6ZR62 CBFB-203ENST00000561924 584 ntTSL 5 BASIC16.82■□□□□ 0.28
RTL4Q6ZR62 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.82■□□□□ 0.28
RTL4Q6ZR62 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.82■□□□□ 0.28
RTL4Q6ZR62 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.82■□□□□ 0.28
RTL4Q6ZR62 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
RTL4Q6ZR62 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.82■□□□□ 0.28
RTL4Q6ZR62 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.82■□□□□ 0.28
RTL4Q6ZR62 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.82■□□□□ 0.28
RTL4Q6ZR62 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RTL4Q6ZR62 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RTL4Q6ZR62 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
RTL4Q6ZR62 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.81■□□□□ 0.28
RTL4Q6ZR62 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.81■□□□□ 0.28
RTL4Q6ZR62 KRT89P-201ENST00000620027 1478 ntBASIC16.81■□□□□ 0.28
RTL4Q6ZR62 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.81■□□□□ 0.28
RTL4Q6ZR62 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RTL4Q6ZR62 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.81■□□□□ 0.28
RTL4Q6ZR62 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RTL4Q6ZR62 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.81■□□□□ 0.28
RTL4Q6ZR62 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
RTL4Q6ZR62 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RTL4Q6ZR62 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.81■□□□□ 0.28
RTL4Q6ZR62 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.81■□□□□ 0.28
RTL4Q6ZR62 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RTL4Q6ZR62 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RTL4Q6ZR62 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RTL4Q6ZR62 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.81■□□□□ 0.28
RTL4Q6ZR62 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.81■□□□□ 0.28
RTL4Q6ZR62 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RTL4Q6ZR62 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RTL4Q6ZR62 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.81■□□□□ 0.28
RTL4Q6ZR62 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RTL4Q6ZR62 TSSC2-201ENST00000450217 709 ntBASIC16.81■□□□□ 0.28
RTL4Q6ZR62 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.81■□□□□ 0.28
RTL4Q6ZR62 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.81■□□□□ 0.28
RTL4Q6ZR62 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.81■□□□□ 0.28
RTL4Q6ZR62 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms