Protein–RNA interactions for Protein: Q6PJP8

DCLRE1A, DNA cross-link repair 1A protein, humanhuman

Predictions only

Length 1,040 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCLRE1AQ6PJP8 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
DCLRE1AQ6PJP8 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
DCLRE1AQ6PJP8 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
DCLRE1AQ6PJP8 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
DCLRE1AQ6PJP8 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.11■□□□□ 0.65
DCLRE1AQ6PJP8 KRT8P47-201ENST00000604727 1398 ntBASIC19.11■□□□□ 0.65
DCLRE1AQ6PJP8 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
DCLRE1AQ6PJP8 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
DCLRE1AQ6PJP8 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
DCLRE1AQ6PJP8 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
DCLRE1AQ6PJP8 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.11■□□□□ 0.65
DCLRE1AQ6PJP8 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
DCLRE1AQ6PJP8 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
DCLRE1AQ6PJP8 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
DCLRE1AQ6PJP8 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC19.11■□□□□ 0.65
DCLRE1AQ6PJP8 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
DCLRE1AQ6PJP8 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC19.11■□□□□ 0.65
DCLRE1AQ6PJP8 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
DCLRE1AQ6PJP8 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC19.11■□□□□ 0.65
DCLRE1AQ6PJP8 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
DCLRE1AQ6PJP8 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
DCLRE1AQ6PJP8 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC19.11■□□□□ 0.65
DCLRE1AQ6PJP8 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
DCLRE1AQ6PJP8 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC19.11■□□□□ 0.65
DCLRE1AQ6PJP8 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
DCLRE1AQ6PJP8 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.11■□□□□ 0.65
DCLRE1AQ6PJP8 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
DCLRE1AQ6PJP8 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
DCLRE1AQ6PJP8 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
DCLRE1AQ6PJP8 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.11■□□□□ 0.65
DCLRE1AQ6PJP8 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
DCLRE1AQ6PJP8 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
DCLRE1AQ6PJP8 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
DCLRE1AQ6PJP8 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.11■□□□□ 0.65
DCLRE1AQ6PJP8 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
DCLRE1AQ6PJP8 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
DCLRE1AQ6PJP8 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.11■□□□□ 0.65
DCLRE1AQ6PJP8 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.1■□□□□ 0.65
DCLRE1AQ6PJP8 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
DCLRE1AQ6PJP8 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
DCLRE1AQ6PJP8 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
DCLRE1AQ6PJP8 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
DCLRE1AQ6PJP8 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
DCLRE1AQ6PJP8 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
DCLRE1AQ6PJP8 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
DCLRE1AQ6PJP8 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
DCLRE1AQ6PJP8 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
DCLRE1AQ6PJP8 PMS2P1-201ENST00000431037 1228 ntBASIC19.1■□□□□ 0.65
DCLRE1AQ6PJP8 AC073648.2-201ENST00000510116 352 ntBASIC19.1■□□□□ 0.65
DCLRE1AQ6PJP8 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC19.1■□□□□ 0.65
DCLRE1AQ6PJP8 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
DCLRE1AQ6PJP8 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC19.1■□□□□ 0.65
DCLRE1AQ6PJP8 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC19.1■□□□□ 0.65
DCLRE1AQ6PJP8 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
DCLRE1AQ6PJP8 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
DCLRE1AQ6PJP8 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
DCLRE1AQ6PJP8 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
DCLRE1AQ6PJP8 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
DCLRE1AQ6PJP8 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
DCLRE1AQ6PJP8 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
DCLRE1AQ6PJP8 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
DCLRE1AQ6PJP8 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
DCLRE1AQ6PJP8 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.1■□□□□ 0.65
DCLRE1AQ6PJP8 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
DCLRE1AQ6PJP8 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC19.09■□□□□ 0.65
DCLRE1AQ6PJP8 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
DCLRE1AQ6PJP8 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
DCLRE1AQ6PJP8 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC19.09■□□□□ 0.65
DCLRE1AQ6PJP8 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
DCLRE1AQ6PJP8 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
DCLRE1AQ6PJP8 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
DCLRE1AQ6PJP8 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
DCLRE1AQ6PJP8 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC19.09■□□□□ 0.65
DCLRE1AQ6PJP8 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
DCLRE1AQ6PJP8 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC19.09■□□□□ 0.65
DCLRE1AQ6PJP8 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
DCLRE1AQ6PJP8 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
DCLRE1AQ6PJP8 KRT18P13-201ENST00000400056 1290 ntBASIC19.09■□□□□ 0.65
DCLRE1AQ6PJP8 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC19.09■□□□□ 0.65
DCLRE1AQ6PJP8 RPP21-221ENST00000428040 594 ntTSL 2 BASIC19.09■□□□□ 0.65
DCLRE1AQ6PJP8 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
DCLRE1AQ6PJP8 AC018712.1-201ENST00000455767 687 ntBASIC19.09■□□□□ 0.65
DCLRE1AQ6PJP8 AC122714.2-201ENST00000502787 707 ntBASIC19.09■□□□□ 0.65
DCLRE1AQ6PJP8 AC093909.1-201ENST00000504731 1122 ntBASIC19.09■□□□□ 0.65
DCLRE1AQ6PJP8 COX5A-202ENST00000562233 441 ntTSL 3 BASIC19.09■□□□□ 0.65
DCLRE1AQ6PJP8 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC19.09■□□□□ 0.65
DCLRE1AQ6PJP8 NME4-212ENST00000621774 904 ntTSL 3 BASIC19.09■□□□□ 0.65
DCLRE1AQ6PJP8 AP000867.4-201ENST00000641616 219 ntBASIC19.09■□□□□ 0.65
DCLRE1AQ6PJP8 AF228730.7-201ENST00000641842 219 ntBASIC19.09■□□□□ 0.65
DCLRE1AQ6PJP8 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
DCLRE1AQ6PJP8 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
DCLRE1AQ6PJP8 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
DCLRE1AQ6PJP8 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
DCLRE1AQ6PJP8 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
DCLRE1AQ6PJP8 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
DCLRE1AQ6PJP8 AC010460.3-201ENST00000511359 1579 ntBASIC19.09■□□□□ 0.65
DCLRE1AQ6PJP8 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.09■□□□□ 0.65
DCLRE1AQ6PJP8 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
DCLRE1AQ6PJP8 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.09■□□□□ 0.65
DCLRE1AQ6PJP8 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.08■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms