Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NIPAL3Q6P499 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NIPAL3Q6P499 AK4P3-201ENST00000418260 669 ntBASIC16.36■□□□□ 0.21
NIPAL3Q6P499 TMPOP1-202ENST00000424642 1267 ntBASIC16.36■□□□□ 0.21
NIPAL3Q6P499 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.36■□□□□ 0.21
NIPAL3Q6P499 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.36■□□□□ 0.21
NIPAL3Q6P499 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.36■□□□□ 0.21
NIPAL3Q6P499 AC006011.2-201ENST00000621313 1158 ntBASIC16.36■□□□□ 0.21
NIPAL3Q6P499 AC011558.1-201ENST00000623459 338 ntBASIC16.36■□□□□ 0.21
NIPAL3Q6P499 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NIPAL3Q6P499 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NIPAL3Q6P499 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NIPAL3Q6P499 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NIPAL3Q6P499 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NIPAL3Q6P499 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
NIPAL3Q6P499 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
NIPAL3Q6P499 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
NIPAL3Q6P499 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.36■□□□□ 0.21
NIPAL3Q6P499 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NIPAL3Q6P499 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.36■□□□□ 0.21
NIPAL3Q6P499 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
NIPAL3Q6P499 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
NIPAL3Q6P499 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NIPAL3Q6P499 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
NIPAL3Q6P499 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NIPAL3Q6P499 KRT18P55-202ENST00000578578 1546 ntBASIC16.35■□□□□ 0.21
NIPAL3Q6P499 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
NIPAL3Q6P499 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NIPAL3Q6P499 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.35■□□□□ 0.21
NIPAL3Q6P499 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NIPAL3Q6P499 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NIPAL3Q6P499 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
NIPAL3Q6P499 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NIPAL3Q6P499 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NIPAL3Q6P499 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
NIPAL3Q6P499 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
NIPAL3Q6P499 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NIPAL3Q6P499 AC034232.1-201ENST00000506026 1064 ntBASIC16.35■□□□□ 0.21
NIPAL3Q6P499 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC16.35■□□□□ 0.21
NIPAL3Q6P499 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
NIPAL3Q6P499 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC16.35■□□□□ 0.21
NIPAL3Q6P499 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
NIPAL3Q6P499 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
NIPAL3Q6P499 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
NIPAL3Q6P499 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.35■□□□□ 0.21
NIPAL3Q6P499 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NIPAL3Q6P499 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NIPAL3Q6P499 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NIPAL3Q6P499 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.35■□□□□ 0.21
NIPAL3Q6P499 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
NIPAL3Q6P499 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
NIPAL3Q6P499 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NIPAL3Q6P499 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
NIPAL3Q6P499 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.35■□□□□ 0.21
NIPAL3Q6P499 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NIPAL3Q6P499 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
NIPAL3Q6P499 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NIPAL3Q6P499 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NIPAL3Q6P499 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NIPAL3Q6P499 PP12613-201ENST00000424958 2230 ntBASIC16.34■□□□□ 0.21
NIPAL3Q6P499 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.34■□□□□ 0.21
NIPAL3Q6P499 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
NIPAL3Q6P499 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
NIPAL3Q6P499 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
NIPAL3Q6P499 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
NIPAL3Q6P499 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.34■□□□□ 0.21
NIPAL3Q6P499 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.34■□□□□ 0.21
NIPAL3Q6P499 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
NIPAL3Q6P499 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.34■□□□□ 0.21
NIPAL3Q6P499 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.34■□□□□ 0.21
NIPAL3Q6P499 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
NIPAL3Q6P499 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NIPAL3Q6P499 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
NIPAL3Q6P499 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
NIPAL3Q6P499 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.34■□□□□ 0.21
NIPAL3Q6P499 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.34■□□□□ 0.21
NIPAL3Q6P499 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NIPAL3Q6P499 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
NIPAL3Q6P499 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC16.34■□□□□ 0.21
NIPAL3Q6P499 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.34■□□□□ 0.21
NIPAL3Q6P499 MIR3917-201ENST00000580971 93 ntBASIC16.34■□□□□ 0.21
NIPAL3Q6P499 MIR3180-4-201ENST00000582223 153 ntBASIC16.34■□□□□ 0.21
NIPAL3Q6P499 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NIPAL3Q6P499 AL157888.1-201ENST00000631930 593 ntBASIC16.34■□□□□ 0.21
NIPAL3Q6P499 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NIPAL3Q6P499 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.34■□□□□ 0.21
NIPAL3Q6P499 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
NIPAL3Q6P499 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
NIPAL3Q6P499 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NIPAL3Q6P499 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NIPAL3Q6P499 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NIPAL3Q6P499 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
NIPAL3Q6P499 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.34■□□□□ 0.21
NIPAL3Q6P499 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.21
NIPAL3Q6P499 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
NIPAL3Q6P499 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
NIPAL3Q6P499 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.33■□□□□ 0.21
NIPAL3Q6P499 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
NIPAL3Q6P499 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
NIPAL3Q6P499 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms