Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HLA-DQA1Q5Y7H0 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.74■□□□□ 0.27
HLA-DQA1Q5Y7H0 AC009154.2-201ENST00000621177 724 ntBASIC16.74■□□□□ 0.27
HLA-DQA1Q5Y7H0 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.74■□□□□ 0.27
HLA-DQA1Q5Y7H0 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.74■□□□□ 0.27
HLA-DQA1Q5Y7H0 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.74■□□□□ 0.27
HLA-DQA1Q5Y7H0 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.74■□□□□ 0.27
HLA-DQA1Q5Y7H0 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HLA-DQA1Q5Y7H0 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HLA-DQA1Q5Y7H0 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
HLA-DQA1Q5Y7H0 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
HLA-DQA1Q5Y7H0 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.74■□□□□ 0.27
HLA-DQA1Q5Y7H0 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HLA-DQA1Q5Y7H0 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
HLA-DQA1Q5Y7H0 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HLA-DQA1Q5Y7H0 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HLA-DQA1Q5Y7H0 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
HLA-DQA1Q5Y7H0 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HLA-DQA1Q5Y7H0 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
HLA-DQA1Q5Y7H0 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HLA-DQA1Q5Y7H0 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HLA-DQA1Q5Y7H0 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
HLA-DQA1Q5Y7H0 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
HLA-DQA1Q5Y7H0 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HLA-DQA1Q5Y7H0 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
HLA-DQA1Q5Y7H0 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.73■□□□□ 0.27
HLA-DQA1Q5Y7H0 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
HLA-DQA1Q5Y7H0 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.73■□□□□ 0.27
HLA-DQA1Q5Y7H0 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HLA-DQA1Q5Y7H0 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.73■□□□□ 0.27
HLA-DQA1Q5Y7H0 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.73■□□□□ 0.27
HLA-DQA1Q5Y7H0 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC16.73■□□□□ 0.27
HLA-DQA1Q5Y7H0 UPK3BP1-201ENST00000428678 509 ntBASIC16.73■□□□□ 0.27
HLA-DQA1Q5Y7H0 CHCHD2P8-201ENST00000429873 447 ntBASIC16.73■□□□□ 0.27
HLA-DQA1Q5Y7H0 TSSC2-201ENST00000450217 709 ntBASIC16.73■□□□□ 0.27
HLA-DQA1Q5Y7H0 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
HLA-DQA1Q5Y7H0 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.73■□□□□ 0.27
HLA-DQA1Q5Y7H0 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
HLA-DQA1Q5Y7H0 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.73■□□□□ 0.27
HLA-DQA1Q5Y7H0 AC093458.2-201ENST00000623150 629 ntBASIC16.73■□□□□ 0.27
HLA-DQA1Q5Y7H0 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.73■□□□□ 0.27
HLA-DQA1Q5Y7H0 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.73■□□□□ 0.27
HLA-DQA1Q5Y7H0 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HLA-DQA1Q5Y7H0 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HLA-DQA1Q5Y7H0 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HLA-DQA1Q5Y7H0 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC16.73■□□□□ 0.27
HLA-DQA1Q5Y7H0 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
HLA-DQA1Q5Y7H0 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
HLA-DQA1Q5Y7H0 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HLA-DQA1Q5Y7H0 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HLA-DQA1Q5Y7H0 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HLA-DQA1Q5Y7H0 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HLA-DQA1Q5Y7H0 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
HLA-DQA1Q5Y7H0 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HLA-DQA1Q5Y7H0 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HLA-DQA1Q5Y7H0 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.72■□□□□ 0.27
HLA-DQA1Q5Y7H0 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HLA-DQA1Q5Y7H0 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
HLA-DQA1Q5Y7H0 LINC00167-201ENST00000530583 1419 ntBASIC16.72■□□□□ 0.27
HLA-DQA1Q5Y7H0 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
HLA-DQA1Q5Y7H0 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HLA-DQA1Q5Y7H0 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HLA-DQA1Q5Y7H0 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HLA-DQA1Q5Y7H0 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HLA-DQA1Q5Y7H0 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
HLA-DQA1Q5Y7H0 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.72■□□□□ 0.27
HLA-DQA1Q5Y7H0 AC135050.7-201ENST00000624508 2218 ntBASIC16.72■□□□□ 0.27
HLA-DQA1Q5Y7H0 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HLA-DQA1Q5Y7H0 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HLA-DQA1Q5Y7H0 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HLA-DQA1Q5Y7H0 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HLA-DQA1Q5Y7H0 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.72■□□□□ 0.27
HLA-DQA1Q5Y7H0 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HLA-DQA1Q5Y7H0 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HLA-DQA1Q5Y7H0 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HLA-DQA1Q5Y7H0 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
HLA-DQA1Q5Y7H0 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.72■□□□□ 0.27
HLA-DQA1Q5Y7H0 AC124864.1-201ENST00000623408 392 ntBASIC16.72■□□□□ 0.27
HLA-DQA1Q5Y7H0 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
HLA-DQA1Q5Y7H0 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HLA-DQA1Q5Y7H0 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
HLA-DQA1Q5Y7H0 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HLA-DQA1Q5Y7H0 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.72■□□□□ 0.27
HLA-DQA1Q5Y7H0 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
HLA-DQA1Q5Y7H0 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.72■□□□□ 0.27
HLA-DQA1Q5Y7H0 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HLA-DQA1Q5Y7H0 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
HLA-DQA1Q5Y7H0 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HLA-DQA1Q5Y7H0 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HLA-DQA1Q5Y7H0 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
HLA-DQA1Q5Y7H0 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
HLA-DQA1Q5Y7H0 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HLA-DQA1Q5Y7H0 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HLA-DQA1Q5Y7H0 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HLA-DQA1Q5Y7H0 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HLA-DQA1Q5Y7H0 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.71■□□□□ 0.27
HLA-DQA1Q5Y7H0 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
HLA-DQA1Q5Y7H0 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HLA-DQA1Q5Y7H0 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HLA-DQA1Q5Y7H0 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms