Protein–RNA interactions for Protein: Q5T3J3

LRIF1, Ligand-dependent nuclear receptor-interacting factor 1, humanhuman

Predictions only

Length 769 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1Q5T3J3 GLDC-219ENST00000640208 420 ntTSL 2 BASIC16.93■□□□□ 0.3
LRIF1Q5T3J3 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.93■□□□□ 0.3
LRIF1Q5T3J3 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.93■□□□□ 0.3
LRIF1Q5T3J3 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LRIF1Q5T3J3 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRIF1Q5T3J3 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
LRIF1Q5T3J3 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRIF1Q5T3J3 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.93■□□□□ 0.3
LRIF1Q5T3J3 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.93■□□□□ 0.3
LRIF1Q5T3J3 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRIF1Q5T3J3 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LRIF1Q5T3J3 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRIF1Q5T3J3 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRIF1Q5T3J3 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.93■□□□□ 0.3
LRIF1Q5T3J3 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.92■□□□□ 0.3
LRIF1Q5T3J3 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.92■□□□□ 0.3
LRIF1Q5T3J3 AL121761.2-201ENST00000598007 1648 ntBASIC16.92■□□□□ 0.3
LRIF1Q5T3J3 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRIF1Q5T3J3 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.92■□□□□ 0.3
LRIF1Q5T3J3 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRIF1Q5T3J3 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.92■□□□□ 0.3
LRIF1Q5T3J3 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
LRIF1Q5T3J3 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LRIF1Q5T3J3 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.92■□□□□ 0.3
LRIF1Q5T3J3 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRIF1Q5T3J3 AC022211.2-201ENST00000585075 2527 ntBASIC16.92■□□□□ 0.3
LRIF1Q5T3J3 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.92■□□□□ 0.3
LRIF1Q5T3J3 BAALC-201ENST00000297574 801 ntTSL 3 BASIC16.92■□□□□ 0.3
LRIF1Q5T3J3 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LRIF1Q5T3J3 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRIF1Q5T3J3 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
LRIF1Q5T3J3 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC16.92■□□□□ 0.3
LRIF1Q5T3J3 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.92■□□□□ 0.3
LRIF1Q5T3J3 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.92■□□□□ 0.3
LRIF1Q5T3J3 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
LRIF1Q5T3J3 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
LRIF1Q5T3J3 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC16.92■□□□□ 0.3
LRIF1Q5T3J3 AC116407.2-201ENST00000613639 860 ntBASIC16.92■□□□□ 0.3
LRIF1Q5T3J3 SNX21-213ENST00000614929 587 ntTSL 5 BASIC16.92■□□□□ 0.3
LRIF1Q5T3J3 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.92■□□□□ 0.3
LRIF1Q5T3J3 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LRIF1Q5T3J3 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.92■□□□□ 0.3
LRIF1Q5T3J3 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRIF1Q5T3J3 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRIF1Q5T3J3 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LRIF1Q5T3J3 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRIF1Q5T3J3 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LRIF1Q5T3J3 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LRIF1Q5T3J3 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRIF1Q5T3J3 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LRIF1Q5T3J3 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LRIF1Q5T3J3 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
LRIF1Q5T3J3 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRIF1Q5T3J3 REXO1L11P-201ENST00000620964 1927 ntBASIC16.92■□□□□ 0.3
LRIF1Q5T3J3 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LRIF1Q5T3J3 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRIF1Q5T3J3 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
LRIF1Q5T3J3 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.91■□□□□ 0.3
LRIF1Q5T3J3 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LRIF1Q5T3J3 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRIF1Q5T3J3 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.91■□□□□ 0.3
LRIF1Q5T3J3 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.91■□□□□ 0.3
LRIF1Q5T3J3 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRIF1Q5T3J3 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRIF1Q5T3J3 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRIF1Q5T3J3 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRIF1Q5T3J3 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.91■□□□□ 0.3
LRIF1Q5T3J3 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.91■□□□□ 0.3
LRIF1Q5T3J3 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRIF1Q5T3J3 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.91■□□□□ 0.3
LRIF1Q5T3J3 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LRIF1Q5T3J3 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.91■□□□□ 0.3
LRIF1Q5T3J3 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
LRIF1Q5T3J3 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LRIF1Q5T3J3 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LRIF1Q5T3J3 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.91■□□□□ 0.3
LRIF1Q5T3J3 AC128688.1-201ENST00000487626 519 ntBASIC16.91■□□□□ 0.3
LRIF1Q5T3J3 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.91■□□□□ 0.3
LRIF1Q5T3J3 AC092865.7-201ENST00000641832 219 ntBASIC16.91■□□□□ 0.3
LRIF1Q5T3J3 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.91■□□□□ 0.3
LRIF1Q5T3J3 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LRIF1Q5T3J3 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.91■□□□□ 0.3
LRIF1Q5T3J3 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.91■□□□□ 0.3
LRIF1Q5T3J3 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
LRIF1Q5T3J3 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRIF1Q5T3J3 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LRIF1Q5T3J3 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRIF1Q5T3J3 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.9■□□□□ 0.3
LRIF1Q5T3J3 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16.9■□□□□ 0.3
LRIF1Q5T3J3 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRIF1Q5T3J3 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.9■□□□□ 0.3
LRIF1Q5T3J3 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.9■□□□□ 0.3
LRIF1Q5T3J3 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRIF1Q5T3J3 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LRIF1Q5T3J3 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.9■□□□□ 0.3
LRIF1Q5T3J3 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LRIF1Q5T3J3 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.9■□□□□ 0.3
LRIF1Q5T3J3 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.9■□□□□ 0.3
LRIF1Q5T3J3 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
LRIF1Q5T3J3 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms