Protein–RNA interactions for Protein: Q5SRH9

TTC39A, Tetratricopeptide repeat protein 39A, humanhuman

Predictions only

Length 613 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39AQ5SRH9 THAP5-204ENST00000438865 868 ntTSL 2 BASIC21.8■■□□□ 1.08
TTC39AQ5SRH9 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC21.8■■□□□ 1.08
TTC39AQ5SRH9 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
TTC39AQ5SRH9 MIR5100-201ENST00000579544 119 ntBASIC21.8■■□□□ 1.08
TTC39AQ5SRH9 IGHV3OR16-7-201ENST00000604106 360 ntBASIC21.8■■□□□ 1.08
TTC39AQ5SRH9 AL591684.3-201ENST00000605187 298 ntBASIC21.8■■□□□ 1.08
TTC39AQ5SRH9 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
TTC39AQ5SRH9 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
TTC39AQ5SRH9 STK4-201ENST00000372801 2038 ntTSL 2 BASIC21.8■■□□□ 1.08
TTC39AQ5SRH9 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC21.8■■□□□ 1.08
TTC39AQ5SRH9 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
TTC39AQ5SRH9 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC21.8■■□□□ 1.08
TTC39AQ5SRH9 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
TTC39AQ5SRH9 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TTC39AQ5SRH9 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC21.8■■□□□ 1.08
TTC39AQ5SRH9 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC21.8■■□□□ 1.08
TTC39AQ5SRH9 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TTC39AQ5SRH9 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TTC39AQ5SRH9 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC21.79■■□□□ 1.08
TTC39AQ5SRH9 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TTC39AQ5SRH9 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TTC39AQ5SRH9 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TTC39AQ5SRH9 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TTC39AQ5SRH9 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TTC39AQ5SRH9 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
TTC39AQ5SRH9 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TTC39AQ5SRH9 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TTC39AQ5SRH9 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TTC39AQ5SRH9 ABALON-201ENST00000629058 1903 ntBASIC21.79■■□□□ 1.08
TTC39AQ5SRH9 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TTC39AQ5SRH9 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC21.79■■□□□ 1.08
TTC39AQ5SRH9 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC21.79■■□□□ 1.08
TTC39AQ5SRH9 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC21.79■■□□□ 1.08
TTC39AQ5SRH9 TPM4P1-201ENST00000436100 807 ntBASIC21.79■■□□□ 1.08
TTC39AQ5SRH9 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC21.79■■□□□ 1.08
TTC39AQ5SRH9 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC21.79■■□□□ 1.08
TTC39AQ5SRH9 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC21.79■■□□□ 1.08
TTC39AQ5SRH9 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC21.79■■□□□ 1.08
TTC39AQ5SRH9 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TTC39AQ5SRH9 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC21.79■■□□□ 1.08
TTC39AQ5SRH9 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC21.79■■□□□ 1.08
TTC39AQ5SRH9 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
TTC39AQ5SRH9 AC100803.2-201ENST00000562459 1963 ntBASIC21.79■■□□□ 1.08
TTC39AQ5SRH9 TBC1D3P5-201ENST00000579401 1545 ntBASIC21.79■■□□□ 1.08
TTC39AQ5SRH9 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TTC39AQ5SRH9 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC21.79■■□□□ 1.08
TTC39AQ5SRH9 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
TTC39AQ5SRH9 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TTC39AQ5SRH9 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
TTC39AQ5SRH9 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TTC39AQ5SRH9 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
TTC39AQ5SRH9 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TTC39AQ5SRH9 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TTC39AQ5SRH9 COMP-202ENST00000425807 2292 ntTSL 2 BASIC21.78■■□□□ 1.08
TTC39AQ5SRH9 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TTC39AQ5SRH9 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC21.78■■□□□ 1.08
TTC39AQ5SRH9 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC21.78■■□□□ 1.08
TTC39AQ5SRH9 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TTC39AQ5SRH9 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TTC39AQ5SRH9 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC21.78■■□□□ 1.08
TTC39AQ5SRH9 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TTC39AQ5SRH9 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
TTC39AQ5SRH9 DANCR-204ENST00000444958 709 ntTSL 3 BASIC21.78■■□□□ 1.08
TTC39AQ5SRH9 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TTC39AQ5SRH9 EMBP1-201ENST00000458200 901 ntBASIC21.78■■□□□ 1.08
TTC39AQ5SRH9 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TTC39AQ5SRH9 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TTC39AQ5SRH9 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TTC39AQ5SRH9 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
TTC39AQ5SRH9 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TTC39AQ5SRH9 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
TTC39AQ5SRH9 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
TTC39AQ5SRH9 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TTC39AQ5SRH9 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TTC39AQ5SRH9 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC21.77■■□□□ 1.08
TTC39AQ5SRH9 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC21.77■■□□□ 1.08
TTC39AQ5SRH9 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TTC39AQ5SRH9 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC21.77■■□□□ 1.08
TTC39AQ5SRH9 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TTC39AQ5SRH9 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC21.77■■□□□ 1.08
TTC39AQ5SRH9 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TTC39AQ5SRH9 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TTC39AQ5SRH9 AC004870.1-201ENST00000315132 882 ntBASIC21.77■■□□□ 1.08
TTC39AQ5SRH9 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC21.77■■□□□ 1.08
TTC39AQ5SRH9 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TTC39AQ5SRH9 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC21.77■■□□□ 1.08
TTC39AQ5SRH9 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TTC39AQ5SRH9 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC21.77■■□□□ 1.08
TTC39AQ5SRH9 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC21.77■■□□□ 1.08
TTC39AQ5SRH9 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC21.77■■□□□ 1.08
TTC39AQ5SRH9 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC21.77■■□□□ 1.08
TTC39AQ5SRH9 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TTC39AQ5SRH9 AC011467.2-201ENST00000598425 242 ntBASIC21.77■■□□□ 1.08
TTC39AQ5SRH9 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TTC39AQ5SRH9 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TTC39AQ5SRH9 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC21.77■■□□□ 1.08
TTC39AQ5SRH9 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC21.77■■□□□ 1.08
TTC39AQ5SRH9 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TTC39AQ5SRH9 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TTC39AQ5SRH9 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC21.77■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms