Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC14.14□□□□□ -0.15
CCL20P78556 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CCL20P78556 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CCL20P78556 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC14.14□□□□□ -0.15
CCL20P78556 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
CCL20P78556 SDHAP2-201ENST00000455183 2001 ntBASIC14.14□□□□□ -0.15
CCL20P78556 AC005915.1-201ENST00000624912 2018 ntBASIC14.14□□□□□ -0.15
CCL20P78556 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC14.14□□□□□ -0.15
CCL20P78556 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CCL20P78556 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCL20P78556 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.14□□□□□ -0.15
CCL20P78556 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
CCL20P78556 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCL20P78556 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CCL20P78556 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCL20P78556 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCL20P78556 TREX2-204ENST00000370212 861 ntTSL 5 BASIC14.14□□□□□ -0.15
CCL20P78556 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CCL20P78556 AP000593.1-201ENST00000393668 712 ntBASIC14.14□□□□□ -0.15
CCL20P78556 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CCL20P78556 AC137761.2-201ENST00000561729 223 ntBASIC14.14□□□□□ -0.15
CCL20P78556 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC14.14□□□□□ -0.15
CCL20P78556 AC145350.3-201ENST00000569033 163 ntBASIC14.14□□□□□ -0.15
CCL20P78556 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC14.14□□□□□ -0.15
CCL20P78556 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCL20P78556 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC14.14□□□□□ -0.15
CCL20P78556 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CCL20P78556 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCL20P78556 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC14.14□□□□□ -0.15
CCL20P78556 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCL20P78556 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.14□□□□□ -0.15
CCL20P78556 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CCL20P78556 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCL20P78556 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCL20P78556 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC14.14□□□□□ -0.15
CCL20P78556 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CCL20P78556 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCL20P78556 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CCL20P78556 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCL20P78556 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC14.14□□□□□ -0.15
CCL20P78556 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
CCL20P78556 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CCL20P78556 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCL20P78556 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.13□□□□□ -0.15
CCL20P78556 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CCL20P78556 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCL20P78556 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCL20P78556 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CCL20P78556 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC14.13□□□□□ -0.15
CCL20P78556 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.13□□□□□ -0.15
CCL20P78556 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CCL20P78556 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CCL20P78556 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCL20P78556 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CCL20P78556 NME6-213ENST00000451657 871 ntTSL 2 BASIC14.13□□□□□ -0.15
CCL20P78556 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CCL20P78556 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CCL20P78556 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCL20P78556 AL121829.2-201ENST00000620908 328 ntBASIC14.13□□□□□ -0.15
CCL20P78556 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC14.13□□□□□ -0.15
CCL20P78556 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCL20P78556 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCL20P78556 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CCL20P78556 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CCL20P78556 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC14.13□□□□□ -0.15
CCL20P78556 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCL20P78556 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CCL20P78556 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CCL20P78556 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CCL20P78556 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CCL20P78556 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC14.13□□□□□ -0.15
CCL20P78556 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCL20P78556 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CCL20P78556 AC100803.2-201ENST00000562459 1963 ntBASIC14.13□□□□□ -0.15
CCL20P78556 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCL20P78556 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCL20P78556 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCL20P78556 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCL20P78556 LINC01126-201ENST00000623515 1646 ntBASIC14.12□□□□□ -0.15
CCL20P78556 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCL20P78556 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
CCL20P78556 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCL20P78556 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCL20P78556 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CCL20P78556 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.12□□□□□ -0.15
CCL20P78556 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCL20P78556 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CCL20P78556 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
CCL20P78556 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC14.12□□□□□ -0.15
CCL20P78556 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC14.12□□□□□ -0.15
CCL20P78556 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCL20P78556 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CCL20P78556 HSCB-202ENST00000398941 955 ntTSL 2 BASIC14.12□□□□□ -0.15
CCL20P78556 AC007322.1-201ENST00000426983 750 ntBASIC14.12□□□□□ -0.15
CCL20P78556 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC14.12□□□□□ -0.15
CCL20P78556 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CCL20P78556 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.12□□□□□ -0.15
CCL20P78556 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCL20P78556 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCL20P78556 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms