Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CX3CL1P78423 SPDYE15P-201ENST00000424157 909 ntBASIC14.48□□□□□ -0.09
CX3CL1P78423 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC14.48□□□□□ -0.09
CX3CL1P78423 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CX3CL1P78423 USF2-205ENST00000594064 1179 ntTSL 2 BASIC14.48□□□□□ -0.09
CX3CL1P78423 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC14.48□□□□□ -0.09
CX3CL1P78423 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC14.48□□□□□ -0.09
CX3CL1P78423 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC14.48□□□□□ -0.09
CX3CL1P78423 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CX3CL1P78423 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CX3CL1P78423 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC14.48□□□□□ -0.09
CX3CL1P78423 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
CX3CL1P78423 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CX3CL1P78423 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CX3CL1P78423 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
CX3CL1P78423 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CX3CL1P78423 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
CX3CL1P78423 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CX3CL1P78423 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CX3CL1P78423 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
CX3CL1P78423 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC14.47□□□□□ -0.09
CX3CL1P78423 PHGDH-209ENST00000641074 1780 ntBASIC14.47□□□□□ -0.09
CX3CL1P78423 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CX3CL1P78423 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CX3CL1P78423 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CX3CL1P78423 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC14.47□□□□□ -0.09
CX3CL1P78423 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CX3CL1P78423 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CX3CL1P78423 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CX3CL1P78423 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
CX3CL1P78423 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC14.47□□□□□ -0.09
CX3CL1P78423 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC14.47□□□□□ -0.09
CX3CL1P78423 POR-209ENST00000439269 1858 ntTSL 2 BASIC14.47□□□□□ -0.09
CX3CL1P78423 FLYWCH1P1-201ENST00000460917 1874 ntBASIC14.47□□□□□ -0.09
CX3CL1P78423 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CX3CL1P78423 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CX3CL1P78423 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CX3CL1P78423 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CX3CL1P78423 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC14.47□□□□□ -0.09
CX3CL1P78423 AC063952.2-201ENST00000498792 1227 ntBASIC14.47□□□□□ -0.09
CX3CL1P78423 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC14.47□□□□□ -0.09
CX3CL1P78423 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CX3CL1P78423 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC14.47□□□□□ -0.09
CX3CL1P78423 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
CX3CL1P78423 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CX3CL1P78423 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CX3CL1P78423 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CX3CL1P78423 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC14.47□□□□□ -0.09
CX3CL1P78423 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CX3CL1P78423 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CX3CL1P78423 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CX3CL1P78423 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CX3CL1P78423 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CX3CL1P78423 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CX3CL1P78423 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CX3CL1P78423 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CX3CL1P78423 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CX3CL1P78423 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CX3CL1P78423 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CX3CL1P78423 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CX3CL1P78423 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CX3CL1P78423 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
CX3CL1P78423 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CX3CL1P78423 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC14.46□□□□□ -0.09
CX3CL1P78423 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
CX3CL1P78423 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CX3CL1P78423 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CX3CL1P78423 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
CX3CL1P78423 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CX3CL1P78423 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CX3CL1P78423 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
CX3CL1P78423 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CX3CL1P78423 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CX3CL1P78423 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CX3CL1P78423 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
CX3CL1P78423 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
CX3CL1P78423 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CX3CL1P78423 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC14.46□□□□□ -0.09
CX3CL1P78423 FAM8A6P-201ENST00000407496 1135 ntBASIC14.46□□□□□ -0.09
CX3CL1P78423 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CX3CL1P78423 AL359075.1-203ENST00000462729 1002 ntBASIC14.46□□□□□ -0.09
CX3CL1P78423 DUX4L26-201ENST00000489078 1255 ntBASIC14.46□□□□□ -0.09
CX3CL1P78423 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CX3CL1P78423 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC14.46□□□□□ -0.09
CX3CL1P78423 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CX3CL1P78423 AC008687.5-201ENST00000593746 558 ntBASIC14.46□□□□□ -0.09
CX3CL1P78423 AL136038.4-201ENST00000603606 1261 ntBASIC14.46□□□□□ -0.09
CX3CL1P78423 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CX3CL1P78423 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC14.46□□□□□ -0.09
CX3CL1P78423 AC079602.3-201ENST00000623931 403 ntBASIC14.46□□□□□ -0.09
CX3CL1P78423 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CX3CL1P78423 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
CX3CL1P78423 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CX3CL1P78423 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
CX3CL1P78423 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
CX3CL1P78423 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CX3CL1P78423 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC14.46□□□□□ -0.09
CX3CL1P78423 EML3-212ENST00000494176 2901 ntTSL 2 BASIC14.46□□□□□ -0.09
CX3CL1P78423 EML3-216ENST00000529309 2909 ntTSL 2 BASIC14.46□□□□□ -0.09
CX3CL1P78423 AL391807.1-203ENST00000604392 2365 ntBASIC14.46□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms