Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RPS4XP62701 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RPS4XP62701 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RPS4XP62701 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
RPS4XP62701 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RPS4XP62701 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.21■□□□□ 0.19
RPS4XP62701 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.21■□□□□ 0.19
RPS4XP62701 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.21■□□□□ 0.19
RPS4XP62701 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
RPS4XP62701 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.21■□□□□ 0.19
RPS4XP62701 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RPS4XP62701 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RPS4XP62701 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RPS4XP62701 AC112907.2-201ENST00000448639 330 ntBASIC16.21■□□□□ 0.19
RPS4XP62701 KRT18P38-201ENST00000449496 1282 ntBASIC16.21■□□□□ 0.19
RPS4XP62701 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.21■□□□□ 0.19
RPS4XP62701 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.21■□□□□ 0.19
RPS4XP62701 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
RPS4XP62701 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
RPS4XP62701 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
RPS4XP62701 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
RPS4XP62701 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.21■□□□□ 0.19
RPS4XP62701 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
RPS4XP62701 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
RPS4XP62701 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
RPS4XP62701 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RPS4XP62701 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.2■□□□□ 0.18
RPS4XP62701 AC022898.2-201ENST00000616822 1312 ntBASIC16.2■□□□□ 0.18
RPS4XP62701 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
RPS4XP62701 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
RPS4XP62701 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.2■□□□□ 0.18
RPS4XP62701 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RPS4XP62701 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RPS4XP62701 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.2■□□□□ 0.18
RPS4XP62701 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
RPS4XP62701 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
RPS4XP62701 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RPS4XP62701 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.2■□□□□ 0.18
RPS4XP62701 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RPS4XP62701 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.2■□□□□ 0.18
RPS4XP62701 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
RPS4XP62701 KRT18P48-201ENST00000434763 852 ntBASIC16.2■□□□□ 0.18
RPS4XP62701 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.2■□□□□ 0.18
RPS4XP62701 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.2■□□□□ 0.18
RPS4XP62701 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.2■□□□□ 0.18
RPS4XP62701 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.2■□□□□ 0.18
RPS4XP62701 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.2■□□□□ 0.18
RPS4XP62701 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.2■□□□□ 0.18
RPS4XP62701 AC069148.1-201ENST00000608741 768 ntBASIC16.2■□□□□ 0.18
RPS4XP62701 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.2■□□□□ 0.18
RPS4XP62701 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.2■□□□□ 0.18
RPS4XP62701 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.2■□□□□ 0.18
RPS4XP62701 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RPS4XP62701 LINC00602-201ENST00000629776 2065 ntBASIC16.2■□□□□ 0.18
RPS4XP62701 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RPS4XP62701 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
RPS4XP62701 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC16.2■□□□□ 0.18
RPS4XP62701 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.19■□□□□ 0.18
RPS4XP62701 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.19■□□□□ 0.18
RPS4XP62701 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RPS4XP62701 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RPS4XP62701 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RPS4XP62701 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.19■□□□□ 0.18
RPS4XP62701 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RPS4XP62701 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RPS4XP62701 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RPS4XP62701 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RPS4XP62701 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RPS4XP62701 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RPS4XP62701 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
RPS4XP62701 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RPS4XP62701 STARP1-201ENST00000397973 869 ntBASIC16.19■□□□□ 0.18
RPS4XP62701 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.19■□□□□ 0.18
RPS4XP62701 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
RPS4XP62701 KRT126P-201ENST00000549467 1181 ntBASIC16.19■□□□□ 0.18
RPS4XP62701 AL136038.3-201ENST00000561909 1096 ntBASIC16.19■□□□□ 0.18
RPS4XP62701 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.19■□□□□ 0.18
RPS4XP62701 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.19■□□□□ 0.18
RPS4XP62701 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.19■□□□□ 0.18
RPS4XP62701 AC116407.4-201ENST00000623319 1061 ntBASIC16.19■□□□□ 0.18
RPS4XP62701 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RPS4XP62701 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
RPS4XP62701 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RPS4XP62701 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.19■□□□□ 0.18
RPS4XP62701 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.19■□□□□ 0.18
RPS4XP62701 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.19■□□□□ 0.18
RPS4XP62701 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.19■□□□□ 0.18
RPS4XP62701 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RPS4XP62701 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.19■□□□□ 0.18
RPS4XP62701 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RPS4XP62701 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RPS4XP62701 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RPS4XP62701 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
RPS4XP62701 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.19■□□□□ 0.18
RPS4XP62701 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RPS4XP62701 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RPS4XP62701 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.18■□□□□ 0.18
RPS4XP62701 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.18■□□□□ 0.18
RPS4XP62701 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RPS4XP62701 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms