Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
AP1S1P61966 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.05■□□□□ 0.48
AP1S1P61966 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.05■□□□□ 0.48
AP1S1P61966 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
AP1S1P61966 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
AP1S1P61966 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
AP1S1P61966 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
AP1S1P61966 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
AP1S1P61966 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
AP1S1P61966 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
AP1S1P61966 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.05■□□□□ 0.48
AP1S1P61966 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
AP1S1P61966 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
AP1S1P61966 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.04■□□□□ 0.48
AP1S1P61966 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
AP1S1P61966 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
AP1S1P61966 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
AP1S1P61966 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
AP1S1P61966 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
AP1S1P61966 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
AP1S1P61966 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.04■□□□□ 0.48
AP1S1P61966 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
AP1S1P61966 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.04■□□□□ 0.48
AP1S1P61966 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
AP1S1P61966 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
AP1S1P61966 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
AP1S1P61966 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
AP1S1P61966 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
AP1S1P61966 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
AP1S1P61966 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
AP1S1P61966 AC096633.1-201ENST00000422446 749 ntBASIC18.04■□□□□ 0.48
AP1S1P61966 NUS1P1-201ENST00000446295 882 ntBASIC18.04■□□□□ 0.48
AP1S1P61966 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
AP1S1P61966 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
AP1S1P61966 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.04■□□□□ 0.48
AP1S1P61966 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.04■□□□□ 0.48
AP1S1P61966 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.04■□□□□ 0.48
AP1S1P61966 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
AP1S1P61966 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
AP1S1P61966 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
AP1S1P61966 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
AP1S1P61966 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.04■□□□□ 0.48
AP1S1P61966 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
AP1S1P61966 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
AP1S1P61966 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
AP1S1P61966 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.04■□□□□ 0.48
AP1S1P61966 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
AP1S1P61966 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.04■□□□□ 0.48
AP1S1P61966 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
AP1S1P61966 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
AP1S1P61966 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
AP1S1P61966 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.04■□□□□ 0.48
AP1S1P61966 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
AP1S1P61966 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.04■□□□□ 0.48
AP1S1P61966 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.03■□□□□ 0.48
AP1S1P61966 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.03■□□□□ 0.48
AP1S1P61966 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
AP1S1P61966 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
AP1S1P61966 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
AP1S1P61966 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
AP1S1P61966 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
AP1S1P61966 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
AP1S1P61966 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
AP1S1P61966 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
AP1S1P61966 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
AP1S1P61966 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.03■□□□□ 0.48
AP1S1P61966 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
AP1S1P61966 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
AP1S1P61966 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.03■□□□□ 0.48
AP1S1P61966 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
AP1S1P61966 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
AP1S1P61966 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.03■□□□□ 0.48
AP1S1P61966 AC009533.2-201ENST00000543664 586 ntBASIC18.03■□□□□ 0.48
AP1S1P61966 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.03■□□□□ 0.48
AP1S1P61966 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.03■□□□□ 0.48
AP1S1P61966 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.03■□□□□ 0.48
AP1S1P61966 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.03■□□□□ 0.48
AP1S1P61966 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
AP1S1P61966 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
AP1S1P61966 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
AP1S1P61966 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.03■□□□□ 0.48
AP1S1P61966 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
AP1S1P61966 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
AP1S1P61966 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
AP1S1P61966 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
AP1S1P61966 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.03■□□□□ 0.48
AP1S1P61966 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
AP1S1P61966 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
AP1S1P61966 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
AP1S1P61966 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
AP1S1P61966 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
AP1S1P61966 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
AP1S1P61966 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
AP1S1P61966 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.03■□□□□ 0.48
AP1S1P61966 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
AP1S1P61966 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.02■□□□□ 0.48
AP1S1P61966 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
AP1S1P61966 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.02■□□□□ 0.48
AP1S1P61966 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.02■□□□□ 0.48
AP1S1P61966 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms