Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 AC108860.2-201ENST00000562760 2183 ntBASIC12.8□□□□□ -0.36
UBE2D3P61077 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC12.8□□□□□ -0.36
UBE2D3P61077 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC12.8□□□□□ -0.36
UBE2D3P61077 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
UBE2D3P61077 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
UBE2D3P61077 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC12.8□□□□□ -0.36
UBE2D3P61077 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
UBE2D3P61077 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC12.8□□□□□ -0.36
UBE2D3P61077 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
UBE2D3P61077 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
UBE2D3P61077 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
UBE2D3P61077 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC12.8□□□□□ -0.36
UBE2D3P61077 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
UBE2D3P61077 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
UBE2D3P61077 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
UBE2D3P61077 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
UBE2D3P61077 AC007663.1-201ENST00000438948 1240 ntBASIC12.8□□□□□ -0.36
UBE2D3P61077 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
UBE2D3P61077 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC12.8□□□□□ -0.36
UBE2D3P61077 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC12.8□□□□□ -0.36
UBE2D3P61077 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC12.8□□□□□ -0.36
UBE2D3P61077 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
UBE2D3P61077 AC010653.2-201ENST00000623505 997 ntBASIC12.8□□□□□ -0.36
UBE2D3P61077 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
UBE2D3P61077 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC12.8□□□□□ -0.36
UBE2D3P61077 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC12.8□□□□□ -0.36
UBE2D3P61077 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
UBE2D3P61077 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC12.8□□□□□ -0.36
UBE2D3P61077 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
UBE2D3P61077 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
UBE2D3P61077 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
UBE2D3P61077 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
UBE2D3P61077 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
UBE2D3P61077 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
UBE2D3P61077 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
UBE2D3P61077 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
UBE2D3P61077 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC12.79□□□□□ -0.36
UBE2D3P61077 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
UBE2D3P61077 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC12.79□□□□□ -0.36
UBE2D3P61077 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
UBE2D3P61077 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
UBE2D3P61077 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
UBE2D3P61077 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
UBE2D3P61077 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC12.79□□□□□ -0.36
UBE2D3P61077 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
UBE2D3P61077 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
UBE2D3P61077 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
UBE2D3P61077 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
UBE2D3P61077 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
UBE2D3P61077 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
UBE2D3P61077 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
UBE2D3P61077 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
UBE2D3P61077 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
UBE2D3P61077 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
UBE2D3P61077 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
UBE2D3P61077 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC12.79□□□□□ -0.36
UBE2D3P61077 KIRREL3-AS3-201ENST00000404882 831 ntBASIC12.79□□□□□ -0.36
UBE2D3P61077 MIR1238-201ENST00000408483 83 ntBASIC12.79□□□□□ -0.36
UBE2D3P61077 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC12.79□□□□□ -0.36
UBE2D3P61077 AL390955.1-201ENST00000428694 934 ntBASIC12.79□□□□□ -0.36
UBE2D3P61077 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC12.79□□□□□ -0.36
UBE2D3P61077 GXYLT1P6-201ENST00000456472 1187 ntBASIC12.79□□□□□ -0.36
UBE2D3P61077 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC12.79□□□□□ -0.36
UBE2D3P61077 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
UBE2D3P61077 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC12.79□□□□□ -0.36
UBE2D3P61077 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC12.79□□□□□ -0.36
UBE2D3P61077 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC12.79□□□□□ -0.36
UBE2D3P61077 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
UBE2D3P61077 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC12.79□□□□□ -0.36
UBE2D3P61077 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC12.79□□□□□ -0.36
UBE2D3P61077 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
UBE2D3P61077 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
UBE2D3P61077 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
UBE2D3P61077 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
UBE2D3P61077 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC12.79□□□□□ -0.36
UBE2D3P61077 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
UBE2D3P61077 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC12.79□□□□□ -0.36
UBE2D3P61077 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
UBE2D3P61077 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
UBE2D3P61077 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC12.79□□□□□ -0.36
UBE2D3P61077 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
UBE2D3P61077 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
UBE2D3P61077 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UBE2D3P61077 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UBE2D3P61077 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC12.78□□□□□ -0.36
UBE2D3P61077 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
UBE2D3P61077 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC12.78□□□□□ -0.36
UBE2D3P61077 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC12.78□□□□□ -0.36
UBE2D3P61077 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC12.78□□□□□ -0.36
UBE2D3P61077 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC12.78□□□□□ -0.36
UBE2D3P61077 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
UBE2D3P61077 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
UBE2D3P61077 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC12.78□□□□□ -0.36
UBE2D3P61077 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
UBE2D3P61077 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
UBE2D3P61077 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
UBE2D3P61077 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC12.78□□□□□ -0.36
UBE2D3P61077 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
UBE2D3P61077 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
UBE2D3P61077 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms