Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATN1P54259 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATN1P54259 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.7■□□□□ 0.74
ATN1P54259 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
ATN1P54259 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATN1P54259 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.7■□□□□ 0.74
ATN1P54259 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.7■□□□□ 0.74
ATN1P54259 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATN1P54259 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
ATN1P54259 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.69■□□□□ 0.74
ATN1P54259 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATN1P54259 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATN1P54259 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ATN1P54259 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ATN1P54259 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
ATN1P54259 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATN1P54259 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATN1P54259 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATN1P54259 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
ATN1P54259 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC19.69■□□□□ 0.74
ATN1P54259 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC19.69■□□□□ 0.74
ATN1P54259 NKTR-203ENST00000442970 646 ntTSL 2 BASIC19.69■□□□□ 0.74
ATN1P54259 PUS1-205ENST00000535067 838 ntTSL 3 BASIC19.69■□□□□ 0.74
ATN1P54259 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC19.69■□□□□ 0.74
ATN1P54259 MIR3908-201ENST00000579798 126 ntBASIC19.69■□□□□ 0.74
ATN1P54259 CYB561-217ENST00000582997 877 ntTSL 5 BASIC19.69■□□□□ 0.74
ATN1P54259 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC19.69■□□□□ 0.74
ATN1P54259 AC073592.5-201ENST00000624854 528 ntBASIC19.69■□□□□ 0.74
ATN1P54259 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ATN1P54259 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
ATN1P54259 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATN1P54259 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
ATN1P54259 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ATN1P54259 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
ATN1P54259 AC093484.2-201ENST00000580996 2166 ntBASIC19.68■□□□□ 0.74
ATN1P54259 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.68■□□□□ 0.74
ATN1P54259 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATN1P54259 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATN1P54259 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.68■□□□□ 0.74
ATN1P54259 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ATN1P54259 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATN1P54259 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
ATN1P54259 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATN1P54259 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.68■□□□□ 0.74
ATN1P54259 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC19.68■□□□□ 0.74
ATN1P54259 BCRP1-201ENST00000444246 691 ntBASIC19.68■□□□□ 0.74
ATN1P54259 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC19.68■□□□□ 0.74
ATN1P54259 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC19.68■□□□□ 0.74
ATN1P54259 AC093512.1-201ENST00000617969 520 ntBASIC19.68■□□□□ 0.74
ATN1P54259 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC19.68■□□□□ 0.74
ATN1P54259 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.68■□□□□ 0.74
ATN1P54259 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
ATN1P54259 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC19.68■□□□□ 0.74
ATN1P54259 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATN1P54259 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ATN1P54259 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATN1P54259 RNF165-205ENST00000588679 2904 ntBASIC19.68■□□□□ 0.74
ATN1P54259 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ATN1P54259 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC19.67■□□□□ 0.74
ATN1P54259 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
ATN1P54259 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ATN1P54259 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATN1P54259 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
ATN1P54259 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
ATN1P54259 AL139400.1-201ENST00000366220 510 ntBASIC19.67■□□□□ 0.74
ATN1P54259 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC19.67■□□□□ 0.74
ATN1P54259 PTMS-202ENST00000389462 773 ntTSL 2 BASIC19.67■□□□□ 0.74
ATN1P54259 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC19.67■□□□□ 0.74
ATN1P54259 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
ATN1P54259 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC19.67■□□□□ 0.74
ATN1P54259 AC004449.1-201ENST00000564240 433 ntBASIC19.67■□□□□ 0.74
ATN1P54259 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
ATN1P54259 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATN1P54259 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
ATN1P54259 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.67■□□□□ 0.74
ATN1P54259 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
ATN1P54259 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.67■□□□□ 0.74
ATN1P54259 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ATN1P54259 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.67■□□□□ 0.74
ATN1P54259 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATN1P54259 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ATN1P54259 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
ATN1P54259 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
ATN1P54259 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.66■□□□□ 0.74
ATN1P54259 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ATN1P54259 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATN1P54259 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATN1P54259 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATN1P54259 CD99-202ENST00000381180 530 ntTSL 2 BASIC19.66■□□□□ 0.74
ATN1P54259 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ATN1P54259 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC19.66■□□□□ 0.74
ATN1P54259 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ATN1P54259 RPS15P9-201ENST00000494093 319 ntBASIC19.66■□□□□ 0.74
ATN1P54259 AC122714.2-201ENST00000502787 707 ntBASIC19.66■□□□□ 0.74
ATN1P54259 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATN1P54259 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC19.66■□□□□ 0.74
ATN1P54259 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ATN1P54259 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC19.66■□□□□ 0.74
ATN1P54259 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC19.66■□□□□ 0.74
ATN1P54259 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms