Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATXN3P54252 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATXN3P54252 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATXN3P54252 AL590627.1-203ENST00000421194 1026 ntBASIC18.34■□□□□ 0.53
ATXN3P54252 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.34■□□□□ 0.53
ATXN3P54252 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATXN3P54252 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC18.34■□□□□ 0.53
ATXN3P54252 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.34■□□□□ 0.53
ATXN3P54252 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.34■□□□□ 0.53
ATXN3P54252 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
ATXN3P54252 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATXN3P54252 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATXN3P54252 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.34■□□□□ 0.53
ATXN3P54252 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.34■□□□□ 0.53
ATXN3P54252 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
ATXN3P54252 Z98044.1-201ENST00000632503 1764 ntBASIC18.34■□□□□ 0.53
ATXN3P54252 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATXN3P54252 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
ATXN3P54252 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ATXN3P54252 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATXN3P54252 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATXN3P54252 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
ATXN3P54252 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATXN3P54252 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.34■□□□□ 0.53
ATXN3P54252 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ATXN3P54252 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATXN3P54252 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATXN3P54252 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.34■□□□□ 0.53
ATXN3P54252 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ATXN3P54252 SDHAP1-207ENST00000440850 2000 ntBASIC18.33■□□□□ 0.53
ATXN3P54252 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.33■□□□□ 0.53
ATXN3P54252 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
ATXN3P54252 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.33■□□□□ 0.53
ATXN3P54252 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ATXN3P54252 NOC2LP2-201ENST00000407594 1944 ntBASIC18.33■□□□□ 0.53
ATXN3P54252 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
ATXN3P54252 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
ATXN3P54252 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
ATXN3P54252 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.33■□□□□ 0.53
ATXN3P54252 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.33■□□□□ 0.53
ATXN3P54252 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.33■□□□□ 0.53
ATXN3P54252 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
ATXN3P54252 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
ATXN3P54252 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ATXN3P54252 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ATXN3P54252 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
ATXN3P54252 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
ATXN3P54252 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ATXN3P54252 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.33■□□□□ 0.52
ATXN3P54252 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
ATXN3P54252 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.33■□□□□ 0.52
ATXN3P54252 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.33■□□□□ 0.52
ATXN3P54252 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ATXN3P54252 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ATXN3P54252 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ATXN3P54252 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ATXN3P54252 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
ATXN3P54252 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATXN3P54252 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATXN3P54252 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ATXN3P54252 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATXN3P54252 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATXN3P54252 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATXN3P54252 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATXN3P54252 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.32■□□□□ 0.52
ATXN3P54252 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATXN3P54252 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ATXN3P54252 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATXN3P54252 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATXN3P54252 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
ATXN3P54252 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.32■□□□□ 0.52
ATXN3P54252 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ATXN3P54252 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATXN3P54252 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ATXN3P54252 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATXN3P54252 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.32■□□□□ 0.52
ATXN3P54252 KRT16P4-201ENST00000453883 522 ntBASIC18.32■□□□□ 0.52
ATXN3P54252 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ATXN3P54252 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
ATXN3P54252 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC18.32■□□□□ 0.52
ATXN3P54252 AC010240.3-201ENST00000607688 395 ntBASIC18.32■□□□□ 0.52
ATXN3P54252 BX640515.1-201ENST00000617215 977 ntBASIC18.32■□□□□ 0.52
ATXN3P54252 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATXN3P54252 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.32■□□□□ 0.52
ATXN3P54252 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATXN3P54252 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATXN3P54252 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.32■□□□□ 0.52
ATXN3P54252 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.32■□□□□ 0.52
ATXN3P54252 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.32■□□□□ 0.52
ATXN3P54252 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATXN3P54252 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATXN3P54252 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.32■□□□□ 0.52
ATXN3P54252 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ATXN3P54252 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATXN3P54252 AC233702.3-201ENST00000578656 1387 ntBASIC18.31■□□□□ 0.52
ATXN3P54252 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.31■□□□□ 0.52
ATXN3P54252 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATXN3P54252 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATXN3P54252 TEX30-205ENST00000376029 959 ntTSL 2 BASIC18.31■□□□□ 0.52
ATXN3P54252 MRPL3P1-201ENST00000400109 1033 ntBASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms